Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.4e-48 195.3 105 100.0
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 9.1e-16 87.0 49 100.0
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.5e-15 84.7 49 98.0
FAN10G4078 Fragaria x ananassa HOM05D007184 ORTHO05D206162 1.5e-13 79.7 105 53.3
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 4.1e-08 61.6 35 94.3
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.1e-08 61.6 35 94.3
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.1e-08 61.6 35 94.3
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.1e-08 61.6 35 94.3
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 4.1e-08 61.6 35 94.3
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.0e-07 59.3 37 83.8
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.0e-07 59.3 37 83.8
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 2.7e-07 58.9 37 83.8
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 2.7e-07 58.9 35 91.4
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 5.9e-07 57.8 37 81.1
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 5.9e-07 57.8 37 81.1
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 7.7e-07 57.4 37 81.1
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 7.7e-07 57.4 37 81.1
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 7.7e-07 57.4 37 78.4
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 7.7e-07 57.4 35 85.7
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 1.0e-06 57.0 35 82.9
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 78.4
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 78.4
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 78.4
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 81.1
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 81.1
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 78.4
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 78.4
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.3e-06 56.6 35 82.9
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 1.3e-06 56.6 37 78.4
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 75.7
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 1.7e-06 56.2 37 78.4
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.7e-06 56.2 35 82.9
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 1.7e-06 56.2 37 78.4
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.3e-06 55.8 35 82.9
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 2.3e-06 55.8 37 81.1
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 2.3e-06 55.8 35 82.9
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 2.3e-06 55.8 37 78.4
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 2.3e-06 55.8 35 82.9
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 2.3e-06 55.8 37 75.7
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 2.3e-06 55.8 35 82.9
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 2.9e-06 55.5 37 75.7
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 2.9e-06 55.5 37 78.4
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 2.9e-06 55.5 37 75.7
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 2.9e-06 55.5 37 75.7
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 3.8e-06 55.1 37 78.4
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 3.8e-06 55.1 37 75.7
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 3.8e-06 55.1 37 75.7
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 5.0e-06 54.7 35 80.0
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 5.0e-06 54.7 35 80.0
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 5.0e-06 54.7 35 80.0
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 5.0e-06 54.7 35 80.0
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 5.0e-06 54.7 37 75.7
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 8.6e-06 53.9 35 77.1
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 8.6e-06 53.9 37 73.0
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 8.6e-06 53.9 35 77.1


User provided reference genes

Program Settings