Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.7e-149 531.6 274 100.0
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-148 529.6 274 99.3
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.5e-144 515.0 272 97.8
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.3e-143 512.3 271 97.4
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.9e-139 497.7 264 97.3
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.2e-138 495.7 264 95.1
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 3.1e-132 475.3 284 88.7
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 8.0e-104 380.9 200 100.0
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 4.6e-83 312.0 277 60.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 7.8e-83 311.2 214 71.5
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.0e-82 310.8 273 59.3
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 1.3e-82 310.5 214 71.5
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 1.1e-79 300.8 265 61.1
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.3e-79 299.7 276 56.9
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 8.9e-79 297.7 287 57.8
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 2.0e-78 296.6 206 69.4
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 4.4e-78 295.4 203 71.4
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 7.5e-78 294.7 280 55.7
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 3.7e-77 292.4 243 64.2
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 5.4e-76 288.5 228 64.0
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 9.2e-76 287.7 223 67.7
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.3e-74 283.9 265 57.0
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.7e-74 283.5 205 68.3
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 6.6e-74 281.6 194 68.0
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 6.6e-74 281.6 279 55.6
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.9e-73 280.0 194 68.0
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.9e-73 280.0 210 67.1
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 1.6e-72 276.9 249 57.8
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.8e-72 276.2 192 69.8
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 2.8e-72 276.2 192 69.8
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 8.1e-72 274.6 273 55.7
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.1e-71 274.2 276 54.0
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.4e-71 273.9 198 65.7
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.3e-71 273.1 245 58.8
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 4.0e-71 272.3 229 59.4
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 5.2e-71 271.9 245 60.4
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 6.8e-71 271.6 283 52.7
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.8e-71 271.6 229 62.0
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 8.9e-71 271.2 192 68.2
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.2e-70 270.8 205 63.9
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.5e-70 270.4 192 68.2
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.4e-70 269.2 279 54.8
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 5.8e-70 268.5 199 65.8
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 2.2e-69 266.5 213 71.4
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 2.9e-69 266.2 203 64.0
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.7e-69 265.8 191 65.4
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 4.9e-69 265.4 199 66.3
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.1e-68 264.2 197 65.5
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.4e-68 263.1 230 60.4
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 9.2e-68 261.2 228 60.1
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.1e-67 260.0 238 58.0
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 2.1e-67 260.0 261 53.6
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 2.7e-67 259.6 196 68.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 4.6e-67 258.8 229 59.0
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 6.0e-67 258.5 225 59.6
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 7.8e-67 258.1 195 65.1
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 1.0e-66 257.7 194 65.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.3e-66 257.3 202 65.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.7e-66 256.9 201 65.7
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.7e-66 256.9 212 61.3
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.0e-66 256.1 247 56.3
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 8.6e-66 254.6 197 64.5
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.1e-65 254.2 193 63.7
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.5e-65 253.8 199 64.8
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 5.6e-65 251.9 197 64.0
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 5.6e-65 251.9 197 64.0
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 5.6e-65 251.9 197 64.0
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 7.3e-65 251.5 186 65.6
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 7.3e-65 251.5 197 64.0
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 9.5e-65 251.1 197 64.0
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 2.1e-64 250.0 226 54.4
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 2.8e-64 249.6 269 52.4
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 3.6e-64 249.2 228 55.7
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 3.6e-64 249.2 199 64.3
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 3.1e-63 246.1 196 62.8
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 5.2e-63 245.4 196 62.8
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 8.9e-63 244.6 196 63.3
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.5e-62 243.8 196 63.8
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.5e-62 243.8 196 62.8
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.0e-62 243.4 196 63.8
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 2.0e-62 243.4 236 52.1
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 2.6e-62 243.0 196 63.8
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 7.6e-62 241.5 207 56.0
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 9.9e-62 241.1 196 61.7
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.7e-61 240.4 206 58.3
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 3.2e-60 236.1 216 56.9
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.2e-59 234.2 203 58.1
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 2.7e-59 233.0 156 71.2
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.3e-58 229.9 233 54.9
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.9e-58 229.2 239 53.6
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.6e-56 223.8 182 63.2
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 8.1e-56 221.5 194 57.2
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.8e-55 220.3 200 55.0
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 5.2e-55 218.8 191 58.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 3.4e-54 216.1 196 53.1
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 9.3e-52 208.0 185 53.0
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.2e-51 207.6 144 66.7
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.2e-51 207.6 188 53.7
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.1e-50 202.2 199 53.8
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.9e-49 200.3 193 53.9
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 5.6e-49 198.7 146 63.7
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.4e-47 194.1 192 53.6
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.2e-38 164.5 179 46.9
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 4.5e-38 162.5 142 69.7
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 7.6e-38 161.8 148 59.5
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 2.4e-36 156.8 183 47.0
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.3e-34 151.0 110 67.3
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.9e-33 147.1 129 55.8
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.6e-32 144.1 140 56.4
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 2.1e-32 143.7 151 53.6
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.0e-30 137.1 133 55.6
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.2e-28 129.8 117 58.1
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.2e-27 127.9 185 37.8
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 1.5e-25 120.9 142 50.7
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 4.3e-25 119.4 140 47.1
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.1e-23 112.8 129 50.4
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.5e-21 105.1 114 52.6
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-20 104.4 110 43.6
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 4.2e-20 102.8 216 32.4
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.6e-19 100.9 69 69.6
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.4e-15 87.0 97 53.6
MCO03G108 Micromonas commoda HOM05D006270 ORTHO05D007755 1.4e-10 71.2 181 32.6
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 6.7e-10 68.9 46 67.4
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 4.1e-07 59.7 78 33.3
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 6.9e-07 58.9 87 34.5
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 3.4e-06 56.6 127 33.1
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 3.4e-06 56.6 97 28.9
arahy.Tifrunner.gnm1.ann1.0JVE27 Arachis hypogaea HOM05D005733 ORTHO05D007442 7.7e-06 55.5 121 26.4


User provided reference genes

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