Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.9e-179 631.3 314 100.0
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 2.0e-82 310.1 315 56.8
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.6e-82 309.7 315 56.8
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.4e-82 308.9 315 56.5
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 9.8e-82 307.8 315 56.2
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 1.1e-80 304.3 315 56.2
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.9e-80 303.5 315 55.6
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.0e-79 298.5 208 76.9
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 4.6e-71 272.3 315 51.1
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 5.2e-67 258.8 315 49.8
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 5.8e-66 255.4 316 48.1
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 1.6e-63 247.3 315 47.6
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 5.1e-62 242.3 315 44.8
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.5e-61 240.7 314 46.2
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 2.5e-61 240.0 316 45.6
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 1.1e-59 234.6 314 45.5
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 4.0e-59 232.6 315 44.4
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 2.6e-58 229.9 283 48.8
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 3.4e-58 229.6 281 45.9
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 5.8e-58 228.8 315 45.4
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 7.6e-58 228.4 315 43.8
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 2.9e-57 226.5 321 44.5
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 4.9e-57 225.7 315 44.4
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 6.4e-57 225.3 315 43.8
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 1.4e-56 224.2 315 44.1
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.4e-56 223.4 315 43.2
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.4e-56 223.4 315 43.2
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 3.2e-56 223.0 337 42.7
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 9.3e-56 221.5 315 42.5
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 9.3e-56 221.5 315 42.9
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.2e-55 221.1 337 41.2
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 2.1e-55 220.3 326 42.3
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 6.0e-55 218.8 315 44.4
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 1.7e-54 217.2 315 41.6
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 2.3e-54 216.9 315 43.2
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 2.3e-54 216.9 333 41.1
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 1.9e-53 213.8 326 41.1
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 2.8e-52 209.9 318 42.1
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 4.8e-52 209.1 315 41.6
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 4.8e-52 209.1 315 41.6
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 2.4e-51 206.8 313 42.8
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 9.0e-51 204.9 314 41.7
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 3.4e-50 203.0 315 40.6
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 3.4e-50 203.0 315 40.6
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 9.9e-50 201.4 331 41.1
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 1.3e-49 201.1 315 40.3
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.7e-49 200.7 318 40.6
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 2.2e-49 200.3 315 40.6
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 2.9e-49 199.9 316 39.2
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 2.9e-49 199.9 314 38.9
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 4.9e-49 199.1 315 40.6
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 8.4e-49 198.4 315 40.0
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 1.9e-48 197.2 317 39.4
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 1.9e-48 197.2 315 39.4
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 2.4e-48 196.8 294 42.2
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 3.2e-48 196.4 315 39.7
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 1.2e-47 194.5 315 39.7
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 1.2e-47 194.5 316 38.0
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.6e-47 194.1 315 39.0
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 2.7e-47 193.4 314 39.8
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 3.5e-47 193.0 314 38.9
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 4.6e-47 192.6 284 42.3
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 7.9e-47 191.8 315 40.3
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 1.8e-46 190.7 312 39.1
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 1.8e-46 190.7 310 40.0
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 2.3e-46 190.3 313 39.6
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 3.0e-46 189.9 315 38.4
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 3.9e-46 189.5 331 39.9
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 5.1e-46 189.1 313 39.0
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 5.1e-46 189.1 313 39.0
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 5.1e-46 189.1 314 40.1
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 8.7e-46 188.3 339 37.8
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 8.7e-46 188.3 339 38.6
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 5.6e-45 185.7 314 37.6
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 7.4e-45 185.3 310 38.7
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 1.3e-44 184.5 313 38.7
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.1e-44 183.7 314 37.3
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 6.2e-44 182.2 310 39.0
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 2.5e-40 170.2 98 87.8
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 2.5e-40 170.2 315 37.1
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 9.3e-40 168.3 380 33.7
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.1e-39 167.2 314 34.7
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 3.5e-39 166.4 314 33.4
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 3.5e-39 166.4 318 35.8
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.3e-38 164.5 314 33.1
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 1.3e-38 164.5 314 33.1
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 6.7e-38 162.2 315 34.0
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 5.7e-37 159.1 315 32.7
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.3e-36 157.9 313 32.6
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 3.7e-36 156.4 382 31.9
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 6.3e-36 155.6 321 32.1
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 6.3e-36 155.6 315 32.4
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 8.2e-36 155.2 314 32.5
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 8.2e-36 155.2 314 32.5
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 1.4e-35 154.5 315 32.1
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.5e-34 149.4 89 83.1
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 5.9e-34 149.1 97 76.3
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 3.6e-31 139.8 152 53.9
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 3.9e-30 136.3 116 60.3
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 1.9e-29 134.0 111 57.7
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 9.7e-29 131.7 105 62.9
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.3e-28 131.3 282 36.2
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 3.1e-27 126.7 325 31.7
FAN06G4723 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.9e-27 125.6 64 96.9
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 6.9e-27 125.6 89 65.2
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 1.3e-25 121.3 330 29.7
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 4.2e-24 116.3 111 52.3
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 5.5e-24 115.9 112 57.1
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 7.2e-24 115.5 111 51.4
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 6.1e-23 112.5 112 54.5
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 7.9e-23 112.1 109 52.3
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 1.4e-22 111.3 112 48.2
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 2.3e-22 110.5 331 28.7
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 5.7e-21 105.9 327 27.8
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 3.7e-20 103.2 111 45.9
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 4.8e-20 102.8 110 51.8
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.7e-17 94.4 81 58.0
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 8.5e-17 92.0 105 44.8
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 1.9e-16 90.9 262 27.9
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 1.1e-13 81.6 296 25.0
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 7.4e-13 79.0 41 87.8
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 9.7e-13 78.6 59 55.9
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.7e-12 77.8 40 92.5
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.0e-09 66.2 34 94.1


User provided reference genes

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