Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 4154.7 2196 100.0
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 4076.2 2196 98.5
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3902.1 2164 95.8
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3894.7 2161 95.5
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3855.4 2238 92.4
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 3665.2 2172 90.2
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 3232.6 2181 80.1
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 3222.2 2181 79.7
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2817.3 2185 69.9
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 2674.8 2184 67.3
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2672.9 2192 66.3
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2662.1 2193 66.2
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 2649.8 2191 66.3
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 2565.0 2194 64.1
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2563.9 2224 64.4
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 2559.3 2195 64.1
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2509.6 2193 65.2
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 2506.1 2203 62.3
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 2489.9 2202 62.9
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2471.4 2192 61.6
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 2440.6 2216 61.2
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 2438.7 2187 62.5
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2434.8 2187 60.5
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 2430.6 2192 61.3
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 2429.4 2194 62.0
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2424.8 2194 61.0
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 2419.8 2193 62.1
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 2416.3 2192 61.8
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 2405.2 1950 67.4
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 2376.3 2195 60.2
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 2337.4 2193 60.0
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 2332.8 2195 59.5
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 2309.6 2192 59.6
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 2306.9 2191 59.2
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 2260.3 2218 58.4
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 2232.6 1997 60.5
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 2229.9 2184 58.6
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2219.5 2189 57.0
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 2218.0 2220 57.4
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 2214.9 2197 56.5
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2206.0 2198 56.9
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 2202.6 2110 58.5
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 2202.2 2191 56.9
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 2194.5 2263 56.6
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2164.4 2202 55.0
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 2164.0 2215 55.6
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 2158.3 2190 56.9
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 2148.6 2190 56.6
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 2139.4 2111 57.2
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 2132.8 2065 57.9
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 2090.5 2151 54.7
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 2088.9 2177 54.5
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 2070.4 2158 55.9
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 2055.4 1883 61.2
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 2051.6 1673 66.5
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 2033.1 1885 61.0
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 2006.1 2186 52.5
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1978.4 2300 50.6
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1975.3 1905 58.5
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1963.0 2162 52.5
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 1884.8 2219 52.3
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1881.3 2264 50.1
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1870.5 2180 52.0
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1870.1 1844 56.8
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1860.1 2106 51.6
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 1845.1 1987 54.8
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 1837.0 1953 55.2
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 1820.8 2042 53.1
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1814.7 2152 49.9
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1728.4 1528 61.1
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1633.6 1989 47.5
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1594.3 1677 55.8
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1541.6 1757 51.4
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1463.7 1816 46.7
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1446.4 1691 51.8
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1436.8 1682 51.3
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1435.2 1555 54.6
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1422.5 1131 66.0
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1407.9 1692 50.1
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 0.0e+00 1352.8 2326 40.9
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 0.0e+00 1233.8 2274 38.7
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 0.0e+00 1201.4 1975 39.1
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 0.0e+00 1158.3 1298 51.4
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1139.4 1019 64.0
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 0.0e+00 1093.2 1023 58.9
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1075.8 1139 54.8
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 2.7e-303 1046.6 979 58.8
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 1.0e-302 1044.6 1131 55.6
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 2.5e-264 917.1 1373 41.2
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.4e-259 900.6 989 51.6
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 9.2e-227 792.3 527 77.2
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 9.5e-224 782.3 875 51.1
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 3.0e-209 734.2 2739 28.7
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 6.4e-204 716.5 524 70.2
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 6.6e-201 706.4 1451 33.6
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 5.5e-195 686.8 649 56.7
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 2.8e-151 541.6 433 66.7
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 3.5e-141 508.1 397 65.5
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 6.1e-138 497.3 377 71.4
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 1.3e-119 436.4 565 51.9
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.3e-111 409.8 425 55.1
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.3e-111 409.8 424 54.2
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.1e-109 402.5 343 64.7
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 1.1e-102 380.2 218 85.3
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 1.1e-97 363.6 216 81.0
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 7.1e-94 350.9 230 76.1
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 2.7e-93 349.0 337 58.8
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 2.0e-88 332.8 183 88.0
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 6.9e-81 307.8 572 37.4
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 9.3e-78 297.4 344 57.8
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 1.2e-77 297.0 304 72.4
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 5.8e-72 278.1 375 56.3
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 8.2e-66 257.7 280 53.6
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 1.3e-58 233.8 128 86.7
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 6.3e-58 231.5 203 58.6
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 9.1e-57 227.6 135 88.9
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.7e-50 206.8 173 63.6
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 4.8e-50 205.3 161 70.2
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.4e-49 203.0 161 68.9
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 3.3e-43 182.6 157 68.2
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 2.8e-42 179.5 144 70.1
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.4e-41 177.2 133 63.2
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.2e-39 169.9 148 62.8
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.9e-39 169.5 148 62.8
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 6.1e-37 161.8 332 47.9
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.8e-34 152.9 73 93.2
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.8e-34 152.9 73 93.2
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 9.1e-33 147.9 85 87.1
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 2.5e-30 139.8 227 41.9
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 3.0e-28 132.9 64 92.2
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 6.8e-28 131.7 373 44.8
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 4.1e-25 122.5 95 63.2
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 1.0e-23 117.9 65 92.3
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 2.3e-23 116.7 65 87.7
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.5e-22 114.0 177 44.1
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 1.4e-17 97.4 146 43.2
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.2e-16 94.4 57 78.9
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 1.6e-16 94.0 53 83.0
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 2.9e-15 89.7 53 81.1
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 7.3e-14 85.1 53 77.4
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 9.5e-14 84.7 56 73.2
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 7.0e-09 68.6 49 75.5
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 7.0e-09 68.6 55 61.8
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 6.6e-07 62.0 55 61.8
Gohir.D06G038000 Gossypium hirsutum HOM05D004910 ORTHO05D030909 1.5e-06 60.8 50 62.0
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.5e-06 60.1 42 76.2
Haze_15793 Corylus avellana HOM05D004910 ORTHO05D006864 3.3e-06 59.7 39 69.2


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