Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0568 Fragaria x ananassa HOM05D005802 ORTHO05D006992 1.1e-29 132.5 63 100.0
FAN01G2984 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.5e-17 89.7 49 89.8
FAN03G1851 Fragaria x ananassa HOM05D005802 ORTHO05D006992 8.5e-17 89.7 56 80.4
FvH4_7g11150 Fragaria vesca HOM05D005802 ORTHO05D006992 3.2e-16 87.8 56 78.6
FAN06G1875 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.2e-16 87.8 56 78.6
FAN06G3617 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.2e-16 87.8 56 78.6
FAN10G1300 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.2e-16 87.8 56 78.6
FAN10G3200 Fragaria x ananassa HOM05D005802 ORTHO05D006992 3.2e-16 87.8 56 78.6
RcHm_v2.0_Chr1g0349161 Rosa chinensis HOM05D005802 ORTHO05D006992 4.3e-13 77.4 76 55.3
MD02G1209900 Malus domestica HOM05D005802 ORTHO05D006992 4.8e-12 73.9 56 64.3
Prupe.2G138600 Prunus persica HOM05D005802 ORTHO05D006992 4.1e-11 70.9 56 62.5
RcHm_v2.0_Chr1g0349231 Rosa chinensis HOM05D005802 ORTHO05D006992 3.4e-10 67.8 63 58.7
RcHm_v2.0_Chr5g0028911 Rosa chinensis HOM05D005802 ORTHO05D006992 4.5e-10 67.4 61 55.7
Haze_02673 Corylus avellana HOM05D005802 ORTHO05D006992 6.5e-09 63.5 56 55.4
Cfa011175 Carpinus fangiana HOM05D005802 ORTHO05D006992 8.5e-09 63.2 50 62.0
CiPaw.13G033000 Carya illinoinensis HOM05D005802 ORTHO05D006992 7.2e-08 60.1 56 51.8
QL04p039160 Quercus lobata HOM05D005802 ORTHO05D006992 1.6e-07 58.9 56 53.6
Ciclev10021687m.g Citrus clementina HOM05D005802 ORTHO05D006992 2.7e-07 58.2 49 59.2
Lalb_Chr12g0208021 Lupinus albus HOM05D005802 ORTHO05D006992 2.7e-07 58.2 50 58.0
GSVIVG01027639001 Vitis vinifera HOM05D005802 ORTHO05D006992 2.7e-07 58.2 56 53.6
Sc02g0002770 Simmondsia chinensis HOM05D005802 ORTHO05D006992 6.1e-07 57.0 49 53.1
CANSAT56G0664 Cannabis sativa HOM05D005802 ORTHO05D006992 1.4e-06 55.8 58 51.7
Lj3g0015572 Lotus japonicus HOM05D005802 ORTHO05D006992 1.4e-06 55.8 51 58.8
VMungo0331G0187 Vigna mungo HOM05D005802 ORTHO05D006992 1.8e-06 55.5 51 56.9
Actinidia12678 Actinidia chinensis HOM05D005802 ORTHO05D006992 2.3e-06 55.1 48 56.2
Actinidia28320 Actinidia chinensis HOM05D005802 ORTHO05D006992 2.3e-06 55.1 48 56.2
Glyma.01G137000 Glycine max HOM05D005802 ORTHO05D006992 2.3e-06 55.1 51 58.8
CSS0000774 Camellia sinensis var. sinensis HOM05D005802 ORTHO05D006992 3.0e-06 54.7 53 52.8
Phvul.010G077700 Phaseolus vulgaris HOM05D005802 ORTHO05D006992 3.0e-06 54.7 51 56.9
RcHm_v2.0_Chr1g0349201 Rosa chinensis HOM05D005802 ORTHO05D006992 3.9e-06 54.3 41 65.9
TWI23G1076 Tripterygium wilfordii HOM05D005802 ORTHO05D006992 3.9e-06 54.3 51 51.0
Nn6g34003 Nelumbo nucifera HOM05D005802 ORTHO05D006992 6.7e-06 53.5 50 56.0
Manes.05G048500 Manihot esculenta HOM05D005802 ORTHO05D006992 8.8e-06 53.1 47 55.3


User provided reference genes

Program Settings