Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 5.8e-115 417.5 205 100.0
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 6.4e-114 414.1 205 99.0
FvH4_7g20010 Fragaria vesca HOM05D010935 ORTHO05D010383 8.3e-114 413.7 205 99.0
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 7.8e-104 380.6 205 94.1
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 2.3e-100 369.0 198 95.5
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 3.3e-94 348.6 206 88.3
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 2.3e-39 166.4 206 55.8
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 2.6e-38 162.9 197 53.3
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 6.5e-34 148.3 206 48.5
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 4.8e-21 105.5 223 38.6
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 2.3e-18 96.7 203 36.0
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 5.0e-18 95.5 210 38.1
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.5e-17 92.0 209 37.8
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 3.6e-16 89.4 208 35.6
Cfa001603 Carpinus fangiana HOM05D010935 ORTHO05D010383 1.0e-15 87.8 181 40.3
Prupe.2G217000 Prunus persica HOM05D010935 ORTHO05D010383 1.4e-15 87.4 200 34.5
COL.COLO4_23723 Corchorus olitorius HOM05D010162 ORTHO05D010383 3.0e-15 86.3 214 36.4
MD07G1177600 Malus domestica HOM05D010935 ORTHO05D010383 1.2e-14 84.3 209 34.0
RcHm_v2.0_Chr1g0363951 Rosa chinensis HOM05D010935 ORTHO05D010383 4.4e-14 82.4 201 34.3
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 7.5e-14 81.6 225 33.8
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.5e-14 81.6 240 30.8
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 2.2e-13 80.1 211 36.5
FvH4_7g20000 Fragaria vesca HOM05D010935 ORTHO05D010383 2.8e-13 79.7 204 33.8
FAN03G0405 Fragaria x ananassa HOM05D010935 ORTHO05D010383 2.8e-13 79.7 204 33.8
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 1.4e-12 77.4 211 34.1
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.4e-12 75.5 244 30.7
ClCG09G020520 Citrullus lanatus HOM05D040659 ORTHO05D010383 4.5e-11 72.4 211 35.1
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 7.8e-11 71.6 185 35.7
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.0e-10 71.2 246 29.7
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.0e-10 68.9 250 31.2
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 8.6e-10 68.2 246 31.3
Peaxi162Scf00254g00044 Petunia axillaris HOM05D011460 ORTHO05D010383 1.5e-09 67.4 221 32.1
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.3e-09 66.2 245 31.4
MELO3C002880.2 Cucumis melo HOM05D040659 ORTHO05D010383 4.3e-09 65.9 203 34.0
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 5.6e-09 65.5 220 30.0
Potri.008G042900 Populus trichocarpa HOM05D010162 ORTHO05D010383 5.6e-09 65.5 219 28.3
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 7.3e-09 65.1 209 30.6
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 1.6e-08 63.9 193 32.6
Lsat_1_v5_gn_2_113841 Lactuca sativa HOM05D011460 ORTHO05D010383 6.1e-08 62.0 204 31.4
Ca_04389_v3 Cicer arietinum L. HOM05D009308 ORTHO05D011513 2.3e-07 60.1 145 33.1
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 3.0e-07 59.7 197 33.0
CsaV3_5G025880 Cucumis sativus L. HOM05D040659 ORTHO05D010383 4.0e-07 59.3 198 33.8
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 8.9e-07 58.2 220 26.4
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 1.2e-06 57.8 213 29.6
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-06 57.4 246 30.5
Manes.10G043400 Manihot esculenta HOM05D010935 ORTHO05D010383 1.5e-06 57.4 198 28.8
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.6e-06 56.6 78 42.3
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 4.4e-06 55.8 93 43.0


User provided reference genes

Program Settings