Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0214 Fragaria x ananassa HOM05D000107 ORTHO05D025397 9.9e-175 616.7 315 100.0
FAN06G2391 Fragaria x ananassa HOM05D000009 ORTHO05D025397 4.7e-84 315.5 167 100.0
FvH4_7g28390 Fragaria vesca HOM05D000009 ORTHO05D000008 6.0e-63 245.4 149 86.6
FAN05G0450 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.0e-62 244.6 156 84.0
FAN03G2452 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.4e-61 238.4 149 83.2
FvH4_7g27891 Fragaria vesca HOM05D000009 ORTHO05D000008 1.3e-60 237.7 151 82.1
FAN10G3211 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.6e-60 237.3 148 83.8
FAN03G1200 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.7e-60 236.1 149 83.9
FAN03G2779 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.7e-60 236.1 149 83.9
FAN06G2518 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.7e-60 236.1 148 85.1
FAN06G3462 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-59 233.4 148 89.9
FvH4_7g28110 Fragaria vesca HOM05D000009 ORTHO05D000008 3.1e-59 233.0 148 85.1
FAN06G1588 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.9e-59 231.9 148 84.5
FvH4_7g25680 Fragaria vesca HOM05D000009 ORTHO05D000008 9.0e-59 231.5 155 85.2
FvH4_7g27642 Fragaria vesca HOM05D000009 ORTHO05D000008 9.0e-59 231.5 147 82.3
FvH4_7g27610 Fragaria vesca HOM05D000009 ORTHO05D000008 1.2e-58 231.1 150 86.7
FAN06G0654 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.6e-58 229.9 149 88.6
FAN10G2142 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.8e-58 228.8 148 81.1
FAN06G0348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.9e-57 226.5 146 87.7
FvH4_7g27330 Fragaria vesca HOM05D000009 ORTHO05D000008 4.9e-57 225.7 148 86.5
FvH4_7g27355 Fragaria vesca HOM05D000009 ORTHO05D000008 4.9e-57 225.7 146 80.8
FAN06G4120 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.4e-57 225.3 156 84.0
FAN06G2045 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-56 224.2 146 81.5
FAN10G0536 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.4e-56 224.2 148 87.2
RcHm_v2.0_Chr1g0373891 Rosa chinensis HOM05D000009 ORTHO05D000008 9.6e-53 211.5 149 75.2
RcHm_v2.0_Chr1g0374841 Rosa chinensis HOM05D000009 ORTHO05D000008 1.3e-52 211.1 147 77.6
RcHm_v2.0_Chr1g0327521 Rosa chinensis HOM05D000009 ORTHO05D000008 4.0e-51 206.1 151 72.8
FAN10G3692 Fragaria x ananassa HOM05D005822 ORTHO05D025397 1.2e-50 204.5 158 77.8
RcHm_v2.0_Chr1g0373781 Rosa chinensis HOM05D000009 ORTHO05D000008 1.1e-48 198.0 150 71.3
FAN06G3821 Fragaria x ananassa HOM05D000107 ORTHO05D002484 8.7e-46 188.3 121 77.7
FAN18G3593 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.3e-45 186.4 116 80.2
FAN06G4344 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.7e-45 185.7 116 79.3
FAN21G2149 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.7e-45 185.7 116 79.3
FAN25G2938 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.4e-45 185.3 116 79.3
FAN06G3214 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.8e-44 182.6 149 70.5
FAN24G3464 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.8e-44 182.6 118 77.1
FAN26G1826 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.1e-43 179.9 118 80.5
FvH4_7g26980 Fragaria vesca HOM05D000009 ORTHO05D025397 9.4e-40 168.3 117 75.2
FAN04G2349 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.5e-37 161.0 137 64.2
FAN24G3421 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.7e-37 158.3 102 73.5
FAN26G1987 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.2e-36 157.1 100 76.0
FAN19G2082 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.8e-36 156.8 109 70.6
FAN14G3209 Fragaria x ananassa HOM05D001995 ORTHO05D001952 4.8e-36 156.0 78 94.9
FAN26G2554 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.4e-35 154.5 100 75.0
Prupe.2G023500 Prunus persica HOM05D000009 ORTHO05D000008 3.1e-35 153.3 154 54.5
FvH4_4g10471 Fragaria vesca HOM05D000107 ORTHO05D000062 9.1e-35 151.8 187 45.5
Prupe.2G023600 Prunus persica HOM05D000009 ORTHO05D000008 1.2e-34 151.4 151 53.0
RcHm_v2.0_Chr1g0317951 Rosa chinensis HOM05D000009 ORTHO05D000008 1.7e-33 147.5 151 57.6
Prupe.2G067600 Prunus persica HOM05D000009 ORTHO05D000008 3.8e-33 146.4 156 51.3
Prupe.2G022400 Prunus persica HOM05D000009 ORTHO05D000008 8.5e-33 145.2 154 53.2
Prupe.2G022500 Prunus persica HOM05D000009 ORTHO05D000008 1.1e-32 144.8 158 49.4
FAN16G1091 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.2e-32 143.3 90 75.6
FAN18G3424 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.2e-32 142.9 90 74.4
FvH4_7g07901 Fragaria vesca HOM05D000107 ORTHO05D000062 4.7e-31 139.4 186 43.0
MD11G1033200 Malus domestica HOM05D000009 ORTHO05D000008 5.1e-30 136.0 147 53.7
FAN24G1594 Fragaria x ananassa HOM05D000107 ORTHO05D002484 8.8e-30 135.2 88 72.7
FvH4_7g01731 Fragaria vesca HOM05D000107 ORTHO05D000062 1.5e-29 134.4 94 70.2
FAN04G0111 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.5e-29 134.4 86 74.4
MD11G1033600 Malus domestica HOM05D000009 ORTHO05D000008 2.0e-29 134.0 149 51.7
MD11G1041100 Malus domestica HOM05D000009 ORTHO05D000008 2.6e-29 133.7 143 53.8
FAN13G0590 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.3e-29 133.3 69 88.4
FvH4_3g30391 Fragaria vesca HOM05D008640 ORTHO05D000062 4.4e-29 132.9 94 69.1
FvH4_6g43082 Fragaria vesca HOM05D000107 ORTHO05D000062 4.4e-29 132.9 94 69.1
FvH4_3g21361 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-29 132.5 98 66.3
FAN09G1319 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.7e-29 131.7 90 68.9
FAN25G0491 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.7e-29 131.7 85 74.1
FvH4_3g29831 Fragaria vesca HOM05D000107 ORTHO05D000062 1.3e-28 131.3 94 68.1
FvH4_4g12773 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-28 131.3 94 68.1
MD11G1034400 Malus domestica HOM05D000009 ORTHO05D000008 1.7e-28 131.0 149 51.0
FvH4_6g21813 Fragaria vesca HOM05D000107 ORTHO05D000062 2.2e-28 130.6 94 68.1
FAN13G2651 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.8e-28 130.2 85 72.9
FAN02G0449 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.8e-28 129.4 86 73.3
FAN28G1364 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.8e-28 129.4 102 63.7
FAN24G2976 Fragaria x ananassa HOM05D000107 ORTHO05D002484 8.2e-28 128.6 86 70.9
MD11G1030400 Malus domestica HOM05D000009 ORTHO05D000008 8.2e-28 128.6 153 49.7
FvH4_3g33045 Fragaria vesca HOM05D000107 ORTHO05D000062 1.1e-27 128.3 94 67.0
FvH4_7g17991 Fragaria vesca HOM05D000107 ORTHO05D000062 1.1e-27 128.3 94 67.0
FvH4_4g14282 Fragaria vesca HOM05D000107 ORTHO05D002484 1.8e-27 127.5 102 62.7
FAN28G0038 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.4e-27 127.1 93 66.7
FvH4_3g36581 Fragaria vesca HOM05D000107 ORTHO05D000062 4.1e-27 126.3 91 67.0
FvH4_7g10641 Fragaria vesca HOM05D000107 ORTHO05D000062 4.1e-27 126.3 94 66.0
FvH4_6g30771 Fragaria vesca HOM05D000107 ORTHO05D000062 5.3e-27 125.9 139 48.9
FvH4_3g25312 Fragaria vesca HOM05D000107 ORTHO05D000062 9.1e-27 125.2 94 66.0
MD11G1011700 Malus domestica HOM05D000009 ORTHO05D000008 9.1e-27 125.2 152 49.3
RcHm_v2.0_Chr7g0237021 Rosa chinensis HOM05D000009 ORTHO05D000008 2.0e-26 124.0 121 56.2
FvH4_5g08081 Fragaria vesca HOM05D000107 ORTHO05D000062 5.0e-25 119.4 97 63.9
MD11G1030300 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-24 117.5 146 49.3
MD11G1045100 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-24 117.5 148 45.9
MD00G1168300 Malus domestica HOM05D000009 ORTHO05D000008 3.2e-24 116.7 146 49.3
FvH4_5g21221 Fragaria vesca HOM05D000107 ORTHO05D000062 5.5e-24 115.9 84 65.5
MD11G1011400 Malus domestica HOM05D000009 ORTHO05D000008 6.1e-23 112.5 152 48.7
MD11G1032000 Malus domestica HOM05D000009 ORTHO05D000008 1.0e-22 111.7 145 49.7
FAN02G4124 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.0e-22 110.2 83 61.4
MD11G1043500 Malus domestica HOM05D000009 ORTHO05D000008 8.8e-22 108.6 145 44.8
FAN04G0537 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.5e-21 107.8 122 47.5
MD11G1031300 Malus domestica HOM05D000009 ORTHO05D000008 4.4e-21 106.3 148 52.7
FvH4_1g29711 Fragaria vesca HOM05D000107 ORTHO05D002484 5.7e-21 105.9 79 65.8
FvH4_4g19121 Fragaria vesca HOM05D000107 ORTHO05D000062 7.4e-21 105.5 79 65.8
FvH4_3g32192 Fragaria vesca HOM05D000107 ORTHO05D002484 1.7e-20 104.4 79 64.6
FvH4_4g03322 Fragaria vesca HOM05D000107 ORTHO05D000062 3.7e-20 103.2 74 64.9
FAN01G0287 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-19 101.7 118 51.7
FAN21G2401 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.1e-19 101.7 79 63.3
FvH4_2g08941 Fragaria vesca HOM05D000107 ORTHO05D000062 1.4e-19 101.3 79 62.0
FAN05G1221 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.4e-19 101.3 71 69.0
FAN06G4306 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.4e-19 101.3 71 69.0
FAN12G3510 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.4e-19 101.3 71 69.0
FAN13G0268 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.8e-19 100.9 71 67.6
FAN28G0585 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.1e-19 100.1 75 65.3
FvH4_2g02271 Fragaria vesca HOM05D000107 ORTHO05D000062 4.1e-19 99.8 79 63.3
FAN08G3614 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.1e-19 99.8 85 57.6
FAN06G4362 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.3e-19 99.4 71 67.6
FAN19G2486 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.3e-19 99.4 72 62.5
FvH4_5g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 9.1e-19 98.6 79 62.0
FAN10G0427 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.1e-19 98.6 70 68.6
FAN09G0629 Fragaria x ananassa HOM05D000041 ORTHO05D002484 3.5e-18 96.7 68 69.1
FvH4_1g22120 Fragaria vesca HOM05D000107 ORTHO05D000062 4.5e-18 96.3 79 59.5
FvH4_4g14563 Fragaria vesca HOM05D000107 ORTHO05D000062 4.5e-18 96.3 79 59.5
FAN21G1821 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.3e-17 94.7 53 79.2
Prupe.2G022900 Prunus persica HOM05D000009 ORTHO05D000008 2.9e-17 93.6 153 38.6
FAN20G1189 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.9e-16 90.9 84 57.1
FvH4_3g22111 Fragaria vesca HOM05D000107 ORTHO05D002484 2.5e-16 90.5 83 60.2
FAN23G0003 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.2e-16 89.7 70 60.0
FvH4_3g22562 Fragaria vesca HOM05D000107 ORTHO05D002484 1.2e-15 88.2 61 70.5
FvH4_4g25941 Fragaria vesca HOM05D000107 ORTHO05D002484 4.7e-15 86.3 61 68.9
FvH4_6g31483 Fragaria vesca HOM05D000107 ORTHO05D002484 4.7e-15 86.3 61 68.9
FvH4_6g40311 Fragaria vesca HOM05D000107 ORTHO05D002484 4.7e-15 86.3 61 68.9
FvH4_1g23921 Fragaria vesca HOM05D000107 ORTHO05D000062 1.4e-14 84.7 61 65.6
FvH4_1g02311 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-14 84.3 61 67.2
FvH4_4g13891 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-14 84.3 61 67.2
FvH4_5g30952 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-14 84.3 61 67.2
FvH4_4g13831 Fragaria vesca HOM05D000107 ORTHO05D000062 6.7e-14 82.4 61 65.6
FAN02G4055 Fragaria x ananassa HOM05D000107 ORTHO05D002484 8.8e-14 82.0 36 97.2
FAN07G1385 Fragaria x ananassa HOM05D001114 ORTHO05D002484 8.8e-14 82.0 36 97.2
FvH4_5g19471 Fragaria vesca HOM05D000107 ORTHO05D000062 2.0e-13 80.9 61 65.6
FAN10G0975 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.3e-13 80.1 61 63.9
FvH4_3g41971 Fragaria vesca HOM05D000107 ORTHO05D000062 7.5e-13 79.0 61 62.3
Manes.17G072100 Manihot esculenta HOM05D000009 ORTHO05D000008 3.7e-12 76.6 141 36.9
Prupe.2G028000 Prunus persica HOM05D000009 ORTHO05D000008 4.1e-11 73.2 75 54.7
FAN05G3146 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.5e-10 70.1 55 61.8
Sabra01G0017200 Salix brachista HOM05D000009 ORTHO05D000008 3.5e-10 70.1 119 44.5
FAN02G3214 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.9e-10 69.3 37 89.2
FvH4_5g31512 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-09 68.2 47 68.1
FAN08G0701 Fragaria x ananassa HOM05D002531 ORTHO05D003018 1.3e-09 68.2 74 48.6
FAN14G2379 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.3e-09 68.2 54 59.3
FAN25G2611 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.9e-09 67.0 106 39.6
Potri.004G196100 Populus trichocarpa HOM05D000009 ORTHO05D000008 5.0e-09 66.2 150 30.7
Prupe.8G117900 Prunus persica HOM05D000009 ORTHO05D000008 5.0e-09 66.2 91 47.3
RcHm_v2.0_Chr1g0320081 Rosa chinensis HOM05D000009 ORTHO05D000008 1.5e-08 64.7 150 30.0
FvH4_1g13961 Fragaria vesca HOM05D000107 ORTHO05D000062 1.9e-08 64.3 49 63.3
RcHm_v2.0_Chr1g0319741 Rosa chinensis HOM05D000009 ORTHO05D000008 5.5e-08 62.8 150 28.7
RcHm_v2.0_Chr1g0320411 Rosa chinensis HOM05D000009 ORTHO05D000008 3.6e-07 60.1 150 28.7
RcHm_v2.0_Chr1g0320891 Rosa chinensis HOM05D000009 ORTHO05D000008 3.6e-07 60.1 149 32.9
RcHm_v2.0_Chr1g0320971 Rosa chinensis HOM05D000009 ORTHO05D000008 3.6e-07 60.1 113 38.9
FAN03G2348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.7e-07 59.7 95 44.2
MD03G1042300 Malus domestica HOM05D000009 ORTHO05D000008 6.1e-07 59.3 148 33.1
RcHm_v2.0_Chr1g0321491 Rosa chinensis HOM05D000009 ORTHO05D000008 6.1e-07 59.3 76 44.7
CSS0002460 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 8.0e-07 58.9 164 27.4
RcHm_v2.0_Chr1g0320131 Rosa chinensis HOM05D000009 ORTHO05D000008 8.0e-07 58.9 115 34.8
Duzib114G0195 Durio zibethinus HOM05D000009 ORTHO05D000008 1.0e-06 58.5 109 35.8
FAN06G2344 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.8e-06 57.8 105 40.0
RcHm_v2.0_Chr1g0320281 Rosa chinensis HOM05D000009 ORTHO05D000008 3.0e-06 57.0 115 33.9
RcHm_v2.0_Chr1g0321091 Rosa chinensis HOM05D000009 ORTHO05D000008 3.0e-06 57.0 150 31.3
GSVIVG01027276001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.0e-06 56.6 136 30.1
FvH4_7g00360 Fragaria vesca HOM05D000009 ORTHO05D000008 5.2e-06 56.2 105 40.0
Rhsim07G0066100 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.2e-06 56.2 144 33.3
Atru.chr1.1287 Acer truncatum HOM05D000009 ORTHO05D000008 6.8e-06 55.8 136 30.1
RcHm_v2.0_Chr1g0320241 Rosa chinensis HOM05D000009 ORTHO05D000008 6.8e-06 55.8 64 48.4
RhsimUnG0036000 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.8e-06 55.5 144 31.9


User provided reference genes

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