Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.0e-269 931.8 453 100.0
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 9.0e-262 906.4 455 97.4
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.6e-261 904.8 453 97.6
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 5.5e-259 897.1 465 94.8
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 2.9e-244 848.2 462 89.6
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 2.7e-229 798.5 389 98.2
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 2.0e-224 782.3 458 83.6
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 4.7e-210 734.6 461 79.8
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.8e-206 722.6 477 75.3
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 5.9e-205 717.6 454 78.2
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 4.9e-191 671.4 453 72.6
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 9.2e-190 667.2 389 80.7
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.1e-189 666.0 473 71.0
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 2.1e-189 666.0 464 71.6
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 1.0e-188 663.7 449 73.3
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 3.9e-188 661.8 460 71.5
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 5.1e-188 661.4 451 73.2
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 5.1e-188 661.4 460 70.7
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 2.5e-187 659.1 462 71.6
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 7.3e-187 657.5 464 70.7
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 1.4e-185 653.3 463 70.0
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 8.9e-185 650.6 387 78.3
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 2.6e-184 649.0 460 72.0
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 1.3e-183 646.7 394 77.9
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 1.7e-183 646.4 465 70.8
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 1.1e-182 643.7 449 71.3
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 2.4e-182 642.5 451 71.2
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.1e-182 641.7 422 74.4
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 1.6e-181 639.8 456 69.5
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 1.6e-181 639.8 459 69.7
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 2.1e-181 639.4 460 71.7
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 2.7e-181 639.0 422 73.9
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 6.0e-181 637.9 449 71.9
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 6.0e-181 637.9 456 70.4
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 7.8e-181 637.5 422 73.9
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 7.8e-181 637.5 455 70.5
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 2.3e-180 636.0 422 73.5
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 6.6e-180 634.4 457 69.6
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 1.9e-179 632.9 462 68.4
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 4.3e-179 631.7 353 83.3
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 4.3e-179 631.7 452 69.9
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.2e-178 630.2 432 71.5
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 1.2e-178 630.2 462 67.7
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 2.1e-178 629.4 394 76.4
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 2.1e-178 629.4 409 73.3
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 1.1e-177 627.1 462 68.6
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 1.4e-177 626.7 462 68.2
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 1.8e-177 626.3 469 66.5
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 4.0e-177 625.2 363 79.9
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 5.2e-177 624.8 375 77.3
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 5.2e-177 624.8 384 77.6
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 1.2e-176 623.6 421 72.4
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 1.2e-176 623.6 422 71.1
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 1.5e-176 623.2 459 66.9
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 2.0e-176 622.9 423 71.4
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 4.4e-176 621.7 404 74.8
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.7e-175 619.8 454 68.7
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 3.8e-175 618.6 490 63.7
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 4.9e-175 618.2 411 72.5
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 1.4e-174 616.7 460 67.0
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 1.9e-174 616.3 390 76.4
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 1.9e-174 616.3 415 72.0
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 2.4e-174 615.9 459 66.0
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 2.4e-174 615.9 463 66.3
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 4.2e-174 615.1 377 75.3
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 1.6e-173 613.2 462 66.5
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 2.1e-173 612.8 377 75.9
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 2.3e-172 609.4 378 74.6
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 3.0e-172 609.0 461 65.7
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 3.0e-172 609.0 467 65.3
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 5.1e-172 608.2 454 67.0
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 6.6e-172 607.8 464 65.5
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 8.7e-172 607.4 458 66.6
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 1.1e-171 607.1 456 66.4
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 1.1e-171 607.1 460 65.7
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 3.3e-171 605.5 441 67.6
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 4.3e-171 605.1 346 81.5
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 1.6e-170 603.2 460 65.0
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 2.1e-170 602.8 446 65.2
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 2.1e-170 602.8 478 65.5
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 3.6e-170 602.1 398 71.6
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 3.6e-170 602.1 402 71.4
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 4.8e-170 601.7 460 64.8
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 4.8e-170 601.7 412 70.4
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 1.1e-169 600.5 412 70.1
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 1.1e-169 600.5 412 70.1
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 3.1e-169 599.0 401 71.3
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 6.9e-169 597.8 398 71.1
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 6.9e-169 597.8 385 73.0
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 9.0e-169 597.4 384 72.4
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 9.0e-169 597.4 407 70.5
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 2.0e-168 596.3 460 64.3
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 2.0e-168 596.3 447 66.0
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 3.4e-168 595.5 397 71.3
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 4.5e-168 595.1 397 71.3
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 4.5e-168 595.1 393 71.8
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 9.9e-168 594.0 397 71.0
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 1.3e-167 593.6 409 70.2
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 3.8e-167 592.0 375 73.3
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 6.4e-167 591.3 397 70.5
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 1.6e-165 586.6 481 62.8
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 1.6e-165 586.6 395 71.1
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 3.0e-164 582.4 429 66.0
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 1.5e-163 580.1 464 62.5
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 2.5e-163 579.3 431 65.2
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 7.4e-163 577.8 430 65.8
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 3.1e-161 572.4 350 77.4
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 6.9e-161 571.2 410 67.8
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 6.9e-161 571.2 420 66.7
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 4.9e-159 565.1 399 69.2
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.4e-158 563.5 318 83.0
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 9.3e-158 560.8 369 71.8
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 2.1e-157 559.7 361 71.7
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 3.0e-156 555.8 363 73.3
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 1.8e-153 546.6 342 75.4
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 5.5e-150 535.0 344 71.8
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 3.9e-148 528.9 350 69.4
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 9.0e-145 517.7 332 71.7
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 4.6e-141 505.4 348 69.0
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 2.3e-132 476.5 398 60.8
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 1.1e-131 474.2 330 69.1
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 5.7e-131 471.9 304 71.4
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 2.2e-130 469.9 449 56.6
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 3.6e-125 452.6 335 64.8
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 1.0e-124 451.1 330 61.2
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 1.3e-122 444.1 341 60.7
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 1.7e-119 433.7 339 60.2
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 8.5e-119 431.4 273 75.5
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.2e-117 427.6 388 57.5
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 1.6e-117 427.2 247 81.0
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 6.3e-114 415.2 336 56.0
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 5.5e-110 402.1 331 55.6
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 8.3e-106 388.3 337 51.9
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 3.4e-91 339.7 283 61.1
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 9.2e-89 331.6 332 46.7
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 6.2e-85 318.9 276 60.5
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 3.9e-79 299.7 328 44.8
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 3.9e-79 299.7 326 47.2
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 4.7e-69 266.2 145 87.6
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 1.6e-56 224.6 261 50.2
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 2.7e-56 223.8 128 78.1
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.8e-39 167.9 164 47.0
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 3.9e-39 166.8 164 47.0
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 1.1e-38 165.2 283 37.5
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 3.4e-35 153.7 126 62.7
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 9.3e-33 145.6 81 81.5
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 6.7e-31 139.4 95 73.7
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 4.5e-27 126.7 70 74.3
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 9.7e-22 109.0 58 86.2
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 1.4e-17 95.1 82 53.7
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 9.4e-09 65.9 52 48.1


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