Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-67 259.2 127 100.0
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 2.1e-67 258.8 127 99.2
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.1e-67 258.8 127 99.2
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.6e-67 258.1 127 97.6
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 6.2e-67 257.3 127 98.4
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.1e-60 236.5 128 89.8
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 5.4e-55 217.6 128 78.9
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 9.2e-55 216.9 127 78.0
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 4.6e-54 214.5 128 78.1
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 5.1e-53 211.1 128 75.8
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 1.6e-51 206.1 127 74.8
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.6e-51 204.9 124 74.2
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 4.7e-51 204.5 127 73.2
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 6.2e-51 204.1 127 73.2
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.4e-50 203.0 127 74.8
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 1.8e-50 202.6 129 72.1
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 2.4e-50 202.2 127 74.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 3.1e-50 201.8 128 72.7
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 3.1e-50 201.8 130 70.0
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.2e-49 199.9 127 74.0
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.2e-49 199.9 127 74.0
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 2.6e-49 198.7 129 71.3
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 2.6e-49 198.7 127 71.7
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 7.6e-49 197.2 133 70.7
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 9.9e-49 196.8 127 74.0
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 9.9e-49 196.8 124 72.6
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.3e-48 196.4 124 71.8
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 1.7e-48 196.1 144 64.6
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 2.2e-48 195.7 129 70.5
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 4.9e-48 194.5 127 70.9
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 4.9e-48 194.5 128 71.1
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.9e-47 192.6 129 68.2
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 4.2e-47 191.4 127 70.1
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 5.4e-47 191.0 127 68.5
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 1.2e-46 189.9 129 68.2
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 1.6e-46 189.5 129 69.0
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 2.1e-46 189.1 127 69.3
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.1e-46 189.1 128 71.1
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 7.8e-46 187.2 128 67.2
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 7.8e-46 187.2 127 68.5
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 7.8e-46 187.2 127 66.9
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 1.0e-45 186.8 127 66.9
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.3e-45 186.4 126 65.9
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 1.3e-45 186.4 136 66.9
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.3e-45 186.4 126 68.3
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 1.7e-45 186.0 127 66.1
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.7e-45 186.0 127 66.1
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.7e-45 186.0 127 66.1
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.7e-45 186.0 127 66.1
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.7e-45 186.0 121 70.2
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 2.3e-45 185.7 129 67.4
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 3.0e-45 185.3 127 64.6
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 3.0e-45 185.3 127 66.1
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 5.1e-45 184.5 127 65.4
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 5.1e-45 184.5 127 65.4
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 5.1e-45 184.5 127 65.4
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.6e-45 184.1 127 67.7
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.6e-45 184.1 127 68.5
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 8.7e-45 183.7 127 66.9
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 1.1e-44 183.3 128 68.0
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.1e-44 183.3 128 68.0
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.1e-44 183.3 125 69.6
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 1.5e-44 183.0 128 64.8
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 1.9e-44 182.6 129 65.9
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 3.3e-44 181.8 131 66.4
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 4.3e-44 181.4 120 69.2
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 7.3e-44 180.6 129 65.1
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 7.3e-44 180.6 120 68.3
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 1.6e-43 179.5 128 68.8
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 1.6e-43 179.5 126 64.3
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 2.8e-43 178.7 116 69.0
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 6.2e-43 177.6 126 66.7
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 1.1e-42 176.8 128 64.1
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.8e-42 176.0 122 66.4
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 2.4e-42 175.6 136 64.7
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 2.4e-42 175.6 129 60.5
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 2.4e-42 175.6 171 54.4
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 4.0e-42 174.9 105 73.3
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.3e-42 174.5 107 72.0
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 6.9e-42 174.1 122 64.8
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 9.0e-42 173.7 129 60.5
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 5.8e-41 171.0 122 64.8
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 5.8e-41 171.0 122 66.4
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 9.9e-41 170.2 144 60.4
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 6.4e-40 167.5 127 62.2
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 4.2e-39 164.9 111 68.5
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.0e-37 160.2 120 58.3
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.1e-37 157.9 111 66.7
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 7.4e-36 154.1 114 60.5
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.4e-34 149.8 111 64.9
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 2.0e-33 146.0 109 63.3
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 5.8e-33 144.4 127 59.1
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 1.9e-31 139.4 122 53.3
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 3.2e-31 138.7 89 70.8
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 3.2e-31 138.7 104 56.7
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 7.1e-31 137.5 99 61.6
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 2.1e-30 136.0 122 51.6
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 3.5e-30 135.2 104 58.7
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 6.7e-29 131.0 90 64.4
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 9.6e-28 127.1 75 74.7
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 3.1e-26 122.1 132 45.5
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 5.3e-26 121.3 96 59.4
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 5.3e-26 121.3 79 67.1
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 6.9e-26 120.9 86 66.3
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.5e-25 119.8 126 44.4
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.5e-25 119.8 126 45.2
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.3e-24 116.7 105 48.6
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 2.2e-24 115.9 131 43.5
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 3.8e-24 115.2 105 52.4
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 3.8e-24 115.2 131 47.3
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 9.3e-23 110.5 131 51.1
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 2.5e-20 102.4 65 67.7
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 3.7e-19 98.6 129 44.2
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.1e-15 87.0 63 57.1
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.2e-15 85.5 62 62.9
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 9.1e-10 67.4 41 68.3
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 1.2e-09 67.0 39 71.8
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 7.7e-09 64.3 45 62.2
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.3e-08 63.5 51 58.8
MD15G1372000 Malus domestica HOM05D006897 ORTHO05D248129 8.5e-08 60.8 45 53.3


User provided reference genes

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