Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.6e-145 518.1 304 100.0
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.9e-138 496.1 300 96.7
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.0e-136 490.3 253 96.4
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.2e-132 476.9 247 96.0
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.5e-132 474.9 247 95.5
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 6.8e-120 434.5 254 87.8
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 1.5e-98 363.6 232 78.4
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 4.7e-97 358.6 231 77.9
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 5.8e-95 351.7 246 70.3
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 5.8e-95 351.7 246 69.9
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 3.7e-94 349.0 250 69.6
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 8.3e-94 347.8 214 80.8
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 8.3e-94 347.8 246 69.5
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.1e-93 347.4 246 68.3
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.4e-93 345.1 237 70.5
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 9.2e-93 344.4 249 68.7
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 9.2e-93 344.4 231 73.6
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.2e-92 344.0 242 69.0
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.7e-92 342.8 226 76.1
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 6.0e-92 341.7 231 71.0
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.7e-91 340.1 221 75.1
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 3.9e-91 339.0 238 71.0
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 8.6e-91 337.8 240 69.2
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.9e-90 336.7 229 70.3
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 3.3e-90 335.9 244 68.0
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 1.2e-89 334.0 248 68.5
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 2.8e-89 332.8 249 67.1
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 6.2e-89 331.6 248 66.9
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.4e-88 330.5 267 62.5
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 4.0e-88 328.9 248 66.5
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.2e-87 327.4 225 71.1
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 2.0e-87 326.6 221 71.5
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 2.6e-87 326.2 248 65.3
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 4.4e-87 325.5 212 75.0
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 5.8e-87 325.1 233 68.7
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 5.8e-87 325.1 248 67.3
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 7.5e-87 324.7 235 68.5
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 2.9e-86 322.8 228 68.9
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 6.4e-86 321.6 227 70.9
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 7.1e-85 318.2 226 69.9
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 7.1e-85 318.2 236 66.5
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 9.2e-85 317.8 237 66.7
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 9.2e-85 317.8 228 67.1
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.2e-84 317.4 246 65.0
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.6e-84 317.0 226 69.9
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 1.6e-84 317.0 229 68.1
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 1.6e-84 317.0 229 68.6
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 2.1e-84 316.6 245 65.3
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.7e-84 316.2 232 65.9
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 3.5e-84 315.8 234 67.9
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 3.5e-84 315.8 241 65.1
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 4.6e-84 315.5 246 65.0
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 7.8e-84 314.7 240 65.0
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.0e-83 314.3 241 65.6
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 1.3e-83 313.9 228 66.2
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 1.7e-83 313.5 226 67.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.7e-83 313.5 229 67.2
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 2.3e-83 313.2 243 62.6
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 3.0e-83 312.8 231 65.4
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 3.9e-83 312.4 241 64.7
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 5.1e-83 312.0 241 63.9
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 8.6e-83 311.2 228 65.8
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.1e-82 310.8 226 64.6
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.5e-82 310.5 231 65.4
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.9e-82 310.1 205 73.7
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.5e-82 309.7 198 74.2
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 5.6e-82 308.5 228 68.0
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.1e-80 304.3 242 64.9
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 2.3e-80 303.1 227 65.6
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 2.3e-80 303.1 227 65.6
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 3.1e-80 302.8 227 65.2
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 5.2e-80 302.0 237 65.4
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 3.4e-79 299.3 207 69.1
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.7e-78 297.0 229 66.4
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.7e-78 297.0 197 72.1
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 3.7e-78 295.8 258 60.1
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 6.4e-78 295.0 227 65.6
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.9e-77 293.5 202 67.8
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 2.4e-77 293.1 202 67.8
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 3.5e-76 289.3 249 60.2
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 4.6e-76 288.9 246 59.8
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 2.3e-75 286.6 232 62.1
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 5.1e-75 285.4 250 59.2
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 2.5e-74 283.1 222 64.4
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 7.3e-74 281.6 230 61.7
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 2.1e-73 280.0 227 62.1
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 2.8e-73 279.6 224 62.9
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 3.6e-73 279.3 227 62.1
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 1.1e-72 277.7 206 65.5
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.4e-72 277.3 230 61.7
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.4e-72 277.3 229 60.3
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.8e-72 276.9 224 62.1
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.8e-72 276.9 224 62.1
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 1.3e-70 270.8 240 57.5
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 8.4e-70 268.1 245 58.8
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 2.4e-69 266.5 230 59.6
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 5.4e-69 265.4 231 62.3
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 9.3e-69 264.6 212 65.1
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 9.3e-69 264.6 213 57.7
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 6.6e-67 258.5 255 55.3
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 2.5e-66 256.5 210 61.4
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.3e-65 254.2 213 57.3
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 3.9e-59 232.6 215 53.5
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 9.6e-58 228.0 211 54.5
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 8.1e-57 224.9 187 62.0
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.1e-56 224.6 191 58.6
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 2.2e-54 216.9 203 52.2
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.8e-48 197.2 207 47.3
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.4e-45 187.6 165 57.0
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 4.1e-40 169.5 117 70.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.9e-21 107.5 91 61.5
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 2.0e-18 97.4 192 31.8
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 3.1e-16 90.1 222 30.6
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 2.9e-14 83.6 71 56.3
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 2.9e-14 83.6 71 56.3
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 7.5e-10 68.9 39 82.1


User provided reference genes

Program Settings