Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.5e-65 252.7 125 100.0
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.1e-63 244.6 125 96.8
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.9e-61 238.4 120 97.5
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.9e-61 238.4 120 97.5
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.8e-47 192.6 109 86.2
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 2.1e-43 179.1 108 77.8
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 3.4e-41 171.8 108 75.9
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 9.8e-41 170.2 104 76.0
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 1.3e-40 169.9 108 73.1
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 6.3e-40 167.5 109 74.3
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.3e-40 167.5 109 70.6
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.1e-39 166.8 108 70.4
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.4e-39 166.4 108 71.3
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 1.4e-39 166.4 108 71.3
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 3.1e-39 165.2 108 70.4
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 5.4e-39 164.5 108 68.5
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 7.0e-39 164.1 109 68.8
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 9.1e-39 163.7 109 69.7
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.6e-38 162.9 109 67.9
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 2.0e-38 162.5 108 65.7
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 2.0e-38 162.5 108 67.6
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 3.5e-38 161.8 108 66.7
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 5.9e-38 161.0 102 73.5
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 5.9e-38 161.0 109 67.9
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.0e-37 160.2 109 68.8
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.0e-37 160.2 109 68.8
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.0e-37 160.2 109 68.8
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 1.7e-37 159.5 108 64.8
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.7e-37 159.5 109 67.0
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.9e-37 158.7 108 65.7
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 6.5e-37 157.5 109 67.9
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 6.5e-37 157.5 108 69.4
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 8.6e-37 157.1 112 69.6
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 8.6e-37 157.1 109 67.9
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 8.6e-37 157.1 109 66.1
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 1.1e-36 156.8 116 64.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.5e-36 156.4 109 68.8
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.5e-36 156.4 92 78.3
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.5e-36 156.4 92 78.3
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.9e-36 156.0 108 66.7
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.5e-36 155.6 109 67.0
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 2.5e-36 155.6 98 73.5
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 3.3e-36 155.2 109 66.1
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 4.2e-36 154.8 108 67.6
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 4.2e-36 154.8 106 67.0
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.2e-36 154.8 108 64.8
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 5.5e-36 154.5 108 64.8
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 9.5e-36 153.7 124 60.5
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 9.5e-36 153.7 108 64.8
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.6e-35 152.9 108 66.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 2.1e-35 152.5 110 65.5
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.1e-35 152.5 107 64.5
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 2.1e-35 152.5 108 64.8
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 2.8e-35 152.1 111 64.9
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.8e-35 152.1 111 64.9
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 2.8e-35 152.1 111 64.9
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 4.7e-35 151.4 109 63.3
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 6.1e-35 151.0 98 71.4
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 6.1e-35 151.0 108 66.7
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 8.0e-35 150.6 111 64.9
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 1.4e-34 149.8 109 65.1
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.8e-34 149.4 100 69.0
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.8e-34 149.4 95 69.5
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.3e-34 149.1 110 62.7
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.3e-34 149.1 103 65.0
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 2.3e-34 149.1 108 63.9
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.5e-33 146.4 93 72.0
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.5e-33 146.4 93 71.0
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.0e-33 146.0 93 69.9
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 2.0e-33 146.0 104 63.5
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 2.6e-33 145.6 104 65.4
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.4e-33 145.2 91 71.4
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 4.4e-33 144.8 96 68.8
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 7.5e-33 144.1 108 61.1
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 7.5e-33 144.1 99 65.7
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 7.5e-33 144.1 99 65.7
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 9.8e-33 143.7 108 62.0
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.7e-32 142.9 97 66.0
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 2.8e-32 142.1 104 63.5
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.8e-32 142.1 108 62.0
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 4.9e-32 141.4 93 69.9
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 6.3e-32 141.0 108 59.3
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 1.8e-31 139.4 113 57.5
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 2.4e-31 139.0 97 64.9
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.1e-31 138.3 108 60.2
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.6e-30 136.3 98 62.2
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.7e-29 132.9 111 52.3
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 3.8e-29 131.7 163 46.6
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 9.5e-28 127.1 67 89.6
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 1.6e-27 126.3 102 57.8
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.0e-26 123.6 95 57.9
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.7e-24 116.3 103 50.5
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 2.0e-22 109.4 69 72.5
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 3.0e-21 105.5 104 50.0
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 7.3e-20 100.9 95 49.5
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 3.6e-19 98.6 103 45.6
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.3e-18 95.9 66 62.1
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.9e-16 89.0 81 58.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 4.9e-16 88.2 98 42.9
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 1.6e-11 73.2 50 72.0
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 8.3e-08 60.8 88 39.8
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.1e-06 56.2 54 42.6
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.5e-06 55.5 37 64.9
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 6.0e-06 54.7 60 43.3


User provided reference genes

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