Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 3.4e-209 731.5 386 100.0
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.1e-199 699.9 388 95.4
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 4.0e-186 654.8 393 88.0
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 2.2e-147 526.2 386 71.5
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 3.0e-141 505.8 388 69.1
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 8.8e-141 504.2 313 88.8
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 1.1e-130 470.7 387 63.0
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 1.4e-130 470.3 390 63.1
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 2.5e-127 459.5 358 67.3
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 7.2e-127 458.0 326 72.4
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 2.3e-125 453.0 381 64.0
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 4.0e-125 452.2 376 64.1
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.2e-124 450.7 390 61.3
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 6.3e-123 444.9 386 60.6
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 8.3e-123 444.5 401 58.9
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.1e-122 444.1 389 60.9
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 3.1e-122 442.6 392 63.0
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 5.4e-122 441.8 391 60.1
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 5.4e-122 441.8 388 58.8
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.7e-121 439.5 388 58.2
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 1.0e-120 437.6 392 59.4
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.7e-120 436.8 379 60.4
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.1e-119 434.1 386 59.8
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 4.3e-119 432.2 395 59.0
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.8e-118 429.5 378 61.6
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 3.6e-118 429.1 399 59.4
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.4e-116 422.5 440 55.5
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.4e-116 422.5 440 55.2
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 1.4e-114 417.2 357 60.2
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 1.8e-114 416.8 357 59.1
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 3.2e-114 416.0 415 57.1
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.0e-112 411.0 367 60.8
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 1.3e-112 410.6 397 57.9
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 1.7e-112 410.2 375 57.1
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 3.9e-112 409.1 375 57.1
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 1.1e-111 407.5 376 57.4
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.9e-111 406.8 388 57.7
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 7.3e-111 404.8 382 57.1
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 9.5e-111 404.4 362 59.4
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 1.6e-110 403.7 392 57.9
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 2.1e-110 403.3 398 56.0
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.8e-110 402.9 368 55.7
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.8e-110 402.9 372 58.6
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.8e-110 402.9 376 57.2
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 3.6e-110 402.5 362 59.9
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 6.2e-110 401.7 377 56.0
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 4.0e-109 399.1 454 51.1
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 1.5e-108 397.1 375 57.1
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 2.6e-108 396.4 363 56.7
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 3.4e-108 396.0 388 54.9
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 3.4e-108 396.0 395 54.9
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 4.4e-108 395.6 375 57.3
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 4.4e-108 395.6 389 55.0
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 1.3e-107 394.0 375 57.6
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.7e-107 393.7 361 58.4
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 2.9e-107 392.9 367 57.5
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 3.7e-107 392.5 375 56.8
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 4.9e-107 392.1 393 57.8
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 5.4e-106 388.7 379 54.1
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 1.6e-105 387.1 388 55.2
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 1.6e-105 387.1 394 55.6
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 2.7e-105 386.3 388 55.4
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 4.6e-105 385.6 396 63.4
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 1.3e-104 384.0 374 54.8
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 3.0e-104 382.9 335 60.3
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 6.6e-104 381.7 392 52.6
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.1e-103 380.9 310 62.6
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 5.6e-103 378.6 384 52.9
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.3e-101 373.2 367 54.2
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 7.3e-95 351.7 391 52.4
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 1.6e-94 350.5 420 48.6
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 9.2e-90 334.7 389 51.4
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 2.1e-89 333.6 360 50.3
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 2.4e-82 310.1 401 47.6
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 5.1e-80 302.4 274 60.9
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 7.3e-79 298.5 275 60.4
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 3.0e-72 276.6 289 52.9
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 4.3e-71 272.7 280 53.9
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 1.8e-69 267.3 344 41.6
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 8.4e-67 258.5 363 43.5
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.1e-61 240.0 252 50.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 7.6e-60 235.3 233 57.1
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 6.0e-57 225.7 231 55.4
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 1.0e-56 224.9 391 39.1
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 7.9e-49 198.7 157 65.0
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 2.5e-47 193.7 168 58.3
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 1.0e-43 181.8 365 32.1
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 3.0e-40 170.2 381 31.5
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 1.6e-33 147.9 291 33.0
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 3.0e-32 143.7 210 46.2
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 9.1e-29 132.1 93 68.8
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 4.5e-28 129.8 294 31.6
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 3.7e-22 110.2 70 80.0
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 4.1e-21 106.7 108 52.8
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.5e-18 98.2 98 53.1
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 4.1e-13 80.1 64 64.1


User provided reference genes

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