Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4988 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-120 436.4 214 100.0
FAN14G3676 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-58 230.7 234 56.8
FvH4_6g45251 Fragaria vesca HOM05D001729 ORTHO05D001155 4.4e-57 225.3 234 56.4
FvH4_6g45260 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-47 194.1 171 62.6
FAN14G2361 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-47 193.7 223 53.4
RcHm_v2.0_Chr2g0163011 Rosa chinensis HOM05D001729 ORTHO05D001155 9.8e-41 171.0 251 45.0
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.3e-36 155.6 193 49.2
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 9.5e-36 154.5 182 50.0
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 3.1e-26 122.9 197 40.1
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 3.4e-25 119.4 208 39.9
RcHm_v2.0_Chr6g0285591 Rosa chinensis HOM05D001729 ORTHO05D001155 2.9e-24 116.3 199 43.2
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 3.7e-24 115.9 195 41.0
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.7e-24 115.9 195 41.0
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.9e-24 115.5 196 40.3
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.1e-22 110.2 203 38.9
FvH4_6g37041 Fragaria vesca HOM05D001729 ORTHO05D001155 3.5e-22 109.4 156 41.7
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 4.6e-22 109.0 198 39.9
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 5.1e-21 105.5 204 36.3
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 1.9e-20 103.6 210 38.1
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 3.3e-20 102.8 200 35.5
FvH4_3g35490 Fragaria vesca HOM05D001729 ORTHO05D001155 4.3e-20 102.4 205 37.6
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.3e-20 102.4 205 37.1
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.6e-20 102.1 210 37.6
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.6e-20 102.1 210 37.6
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 5.6e-20 102.1 200 35.0
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 1.6e-19 100.5 214 36.4
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-18 96.7 194 38.1
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-18 96.7 194 38.1
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 4.0e-18 95.9 208 33.7
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 6.8e-18 95.1 183 37.7
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 1.5e-17 94.0 198 34.8
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-17 94.0 194 37.6
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-17 94.0 198 34.8
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 1.5e-17 94.0 227 32.6
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 3.4e-17 92.8 196 38.8
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 4.4e-17 92.4 190 35.3
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 7.6e-17 91.7 196 36.2
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.6e-17 91.7 198 34.3
FvH4_6g46260 Fragaria vesca HOM05D001729 ORTHO05D001155 1.3e-16 90.9 185 36.8
FAN02G3911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-16 90.1 186 37.6
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.4e-16 88.6 180 33.9
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 8.4e-16 88.2 198 36.4
RcHm_v2.0_Chr6g0276071 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-15 87.8 160 36.9
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 1.4e-15 87.4 185 36.2
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-15 87.0 223 32.3
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 2.4e-15 86.7 206 33.5
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 4.1e-15 85.9 188 35.1
FAN11G2672 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-15 85.5 193 34.2
FAN16G0249 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-15 85.5 196 33.7
FvH4_3g30171 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-14 84.3 197 33.5
FvH4_3g44471 Fragaria vesca HOM05D001729 ORTHO05D001155 2.1e-14 83.6 196 33.2
FAN11G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-14 83.6 178 34.3
FAN02G3887 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.5e-14 82.8 206 32.0
Prupe.3G246100 Prunus persica HOM05D001729 ORTHO05D001155 3.5e-14 82.8 164 36.0
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 4.6e-14 82.4 197 35.0
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 1.0e-13 81.3 183 35.0
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 1.0e-13 81.3 204 34.8
FAN16G0429 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-13 80.9 176 33.5
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-13 80.5 202 36.1
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-13 80.5 193 32.1
FvH4_3g44510 Fragaria vesca HOM05D001729 ORTHO05D001155 6.6e-13 78.6 188 33.0
FAN06G0675 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-12 77.4 216 31.9
FAN06G3231 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-12 77.4 216 31.9
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-12 77.4 188 33.0
Prupe.6G075400 Prunus persica HOM05D001729 ORTHO05D001155 1.9e-12 77.0 174 36.8
FvH4_7g31431 Fragaria vesca HOM05D001729 ORTHO05D001155 2.5e-12 76.6 216 31.9
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 5.6e-12 75.5 188 33.5
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-11 74.3 160 35.0
FAN21G1312 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-11 74.3 165 33.3
FvH4_3g43730 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-11 73.9 195 29.2
FvH4_4g17121 Fragaria vesca HOM05D001729 ORTHO05D001155 2.1e-11 73.6 171 33.9
FAN07G0471 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-11 73.6 206 33.5
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-11 73.6 210 31.0
RcHm_v2.0_Chr5g0081171 Rosa chinensis HOM05D001729 ORTHO05D001155 2.1e-11 73.6 197 32.5
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-11 72.4 167 32.9
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.2e-11 72.0 213 29.1
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.2e-11 72.0 196 31.6
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 6.2e-11 72.0 142 38.7
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 8.1e-11 71.6 156 34.6
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-10 70.9 175 32.0
FvH4_2g24261 Fragaria vesca HOM05D001729 ORTHO05D001155 2.4e-10 70.1 159 35.8
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 2.4e-10 70.1 148 37.2
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-10 69.7 200 31.0
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.0e-10 69.3 156 36.5
RcHm_v2.0_Chr6g0292091 Rosa chinensis HOM05D001729 ORTHO05D001155 4.0e-10 69.3 155 37.4
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 5.2e-10 68.9 204 30.9
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 6.9e-10 68.6 157 34.4
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.9e-10 68.2 208 31.2
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.9e-10 68.2 59 55.9
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 1.5e-09 67.4 177 32.2
MD04G1180900 Malus domestica HOM05D001729 ORTHO05D001155 2.0e-09 67.0 104 42.3
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 2.0e-09 67.0 211 26.5
FAN03G2850 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.4e-09 66.2 204 29.9
FAN14G2668 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.4e-09 65.9 59 57.6
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.6e-09 65.1 188 33.5
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-08 64.3 184 33.7
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 1.3e-08 64.3 139 36.0
FAN26G1025 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-08 63.9 188 28.2
FAN03G2781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-08 63.5 196 30.1
FAN03G3155 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-08 63.5 195 28.7
FAN05G5688 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-08 63.5 163 31.3
MD03G1256400 Malus domestica HOM05D001729 ORTHO05D001155 2.2e-08 63.5 154 34.4
FAN01G0708 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-08 62.8 190 30.0
Prupe.8G110700 Prunus persica HOM05D001729 ORTHO05D001155 3.8e-08 62.8 177 32.2
QL05p008212 Quercus lobata HOM05D001729 ORTHO05D001155 3.8e-08 62.8 158 34.2
QL05p065010 Quercus lobata HOM05D001729 ORTHO05D001155 3.8e-08 62.8 164 28.7
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 4.9e-08 62.4 148 31.8
FAN24G2236 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.9e-08 62.4 146 37.0
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 4.9e-08 62.4 165 32.7
CSS0039427 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 6.4e-08 62.0 131 33.6
FvH4_6g02041 Fragaria vesca HOM05D001729 ORTHO05D001155 6.4e-08 62.0 168 29.8
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 6.4e-08 62.0 140 30.7
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 8.4e-08 61.6 137 32.8
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.1e-07 61.2 120 35.8
FAN02G1588 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-07 61.2 59 59.3
FvH4_1g02011 Fragaria vesca HOM05D001729 ORTHO05D001155 1.9e-07 60.5 187 27.8
FAN19G0745 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-07 60.5 187 27.8
QL05p012589 Quercus lobata HOM05D001729 ORTHO05D001155 1.9e-07 60.5 150 30.0
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 4.2e-07 59.3 159 30.8
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 4.2e-07 59.3 135 31.9
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 4.2e-07 59.3 132 32.6
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 5.4e-07 58.9 176 28.4
FAN05G5452 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.4e-07 58.9 136 35.3
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 5.4e-07 58.9 138 30.4
Prupe.1G509700 Prunus persica HOM05D001729 ORTHO05D001155 7.1e-07 58.5 58 53.4
FvH4_6g40892 Fragaria vesca HOM05D001729 ORTHO05D001155 9.3e-07 58.2 167 32.3
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 9.3e-07 58.2 173 31.2
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-06 57.8 156 27.6
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-06 57.4 136 34.6
Dinv35017 Davidia involucrata HOM05D008898 ORTHO05D001155 2.1e-06 57.0 133 28.6
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-06 57.0 139 35.3
HanXRQChr15g0474341 Helianthus annuus HOM05D008898 ORTHO05D001155 2.7e-06 56.6 128 30.5
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 3.5e-06 56.2 95 41.1
RcHm_v2.0_Chr2g0164671 Rosa chinensis HOM05D001729 ORTHO05D001155 3.5e-06 56.2 60 53.3
MD05G1324200 Malus domestica HOM05D001729 ORTHO05D001155 4.6e-06 55.8 165 29.1
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 4.6e-06 55.8 170 30.6
FAN01G0742 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.0e-06 55.5 141 31.2
FAN02G3994 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.0e-06 55.5 152 32.2
RhsimUnG0091800 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.0e-06 55.5 190 26.3
Lsat_1_v5_gn_5_38300 Lactuca sativa HOM05D008898 ORTHO05D001155 7.8e-06 55.1 136 31.6


User provided reference genes

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