Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.6e-312 1074.3 519 100.0
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 5.1e-309 1063.5 519 98.8
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.6e-309 1063.1 519 99.2
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-308 1062.0 519 98.7
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-308 1062.0 519 98.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.8e-306 1053.1 531 96.6
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 3.0e-285 984.6 519 90.9
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.7e-259 899.0 512 83.6
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.1e-250 869.8 514 80.9
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 7.4e-244 847.0 519 77.6
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.7e-243 845.9 511 77.1
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.1e-242 843.2 511 76.7
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.9e-241 837.4 511 76.5
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.9e-240 835.1 510 77.5
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.8e-240 834.7 514 76.7
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.5e-239 832.8 513 78.6
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 2.5e-239 832.0 492 79.5
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.2e-238 829.7 492 79.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.8e-237 825.9 502 76.9
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 5.2e-237 824.3 511 75.9
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 6.8e-237 823.9 495 77.4
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 6.8e-237 823.9 512 76.2
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 2.6e-236 822.0 506 76.1
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 5.7e-236 820.8 520 75.2
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 5.7e-236 820.8 514 75.3
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 9.8e-236 820.1 513 76.2
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.3e-235 819.7 511 76.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 2.4e-234 815.5 508 78.1
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.0e-233 812.4 514 74.5
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.0e-232 810.1 505 75.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 3.2e-231 805.1 512 75.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 9.4e-231 803.5 517 75.4
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 3.6e-230 801.6 540 71.3
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.5e-228 796.2 501 76.0
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.0e-228 795.8 510 74.3
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 1.3e-227 793.1 510 74.3
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.7e-227 792.7 508 73.2
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.3e-227 790.8 519 73.6
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.4e-226 789.6 509 72.3
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 2.4e-226 788.9 513 73.9
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 3.1e-226 788.5 509 72.9
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 4.1e-226 788.1 505 74.3
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.6e-225 786.2 522 71.6
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 2.0e-225 785.8 509 72.7
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.8e-224 781.6 511 72.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 5.0e-224 781.2 498 72.7
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.1e-223 780.0 499 73.3
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.1e-223 780.0 516 74.6
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.1e-223 780.0 509 71.5
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.1e-223 780.0 516 73.1
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.1e-223 780.0 516 73.3
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.5e-223 779.6 509 71.5
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.9e-223 779.2 502 72.1
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 5.6e-223 777.7 508 72.6
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.2e-222 776.5 509 72.1
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 8.0e-222 773.9 505 71.7
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 8.0e-222 773.9 521 70.8
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.0e-221 773.5 519 72.1
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 1.0e-221 773.5 516 71.9
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 4.0e-221 771.5 510 70.4
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 6.8e-221 770.8 503 71.8
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 7.5e-220 767.3 509 71.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 7.5e-220 767.3 517 71.6
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 3.7e-219 765.0 509 71.1
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 3.7e-219 765.0 509 71.1
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 4.9e-219 764.6 513 70.6
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.1e-218 763.5 581 65.6
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 5.4e-218 761.1 515 71.5
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 5.4e-218 761.1 515 71.5
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 5.4e-218 761.1 507 73.4
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 7.0e-218 760.8 492 73.6
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.3e-216 756.5 506 70.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.7e-216 756.1 522 70.1
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 1.7e-216 756.1 506 70.6
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 3.9e-216 755.0 510 71.6
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.5e-215 753.1 516 69.2
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 3.6e-214 748.4 521 69.3
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 3.1e-213 745.3 525 68.8
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.5e-212 743.0 524 68.7
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 2.6e-212 742.3 500 70.6
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.7e-211 739.6 513 69.0
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.6e-209 733.0 505 70.3
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.3e-208 729.2 519 68.2
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 8.6e-208 727.2 452 75.4
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 8.1e-206 720.7 520 67.1
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.1e-205 720.3 506 67.2
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 8.9e-197 690.6 524 64.9
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 8.4e-195 684.1 511 65.8
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.1e-194 683.7 511 68.1
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.2e-194 682.2 495 66.9
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.8e-190 669.1 444 72.7
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 3.6e-190 668.7 434 71.2
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 7.6e-188 661.0 490 65.1
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 2.2e-187 659.4 504 63.3
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.9e-187 659.1 510 64.3
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 9.3e-186 654.1 497 64.4
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 7.3e-183 644.4 353 83.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.6e-182 643.3 516 61.0
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.6e-182 643.3 510 63.1
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.7e-179 633.3 485 62.7
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.2e-170 602.4 425 69.2
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.2e-169 600.5 410 71.2
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 5.5e-122 442.2 263 76.4
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 3.6e-121 439.5 380 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 2.4e-117 426.8 404 50.7
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 3.8e-115 419.5 379 53.0
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.1e-114 417.9 342 55.3
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 6.6e-107 392.1 393 47.3
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.6e-76 291.2 173 75.7
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.3e-67 261.5 162 71.6
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 7.6e-55 219.2 120 85.8
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 6.0e-44 183.0 112 78.6
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.8e-35 154.8 122 62.3
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 4.8e-33 146.7 314 30.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 6.5e-22 109.8 94 53.2
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.5e-18 98.6 57 78.9
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 5.5e-13 80.1 73 53.4
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 5.5e-13 80.1 73 53.4
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 5.5e-13 80.1 73 53.4
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.3e-06 58.9 99 30.3
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 5.0e-06 57.0 57 36.8


User provided reference genes

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