Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4801 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.2e-49 199.5 102 100.0
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 1.7e-46 189.1 101 95.0
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.7e-46 189.1 101 95.0
FAN02G0526 Fragaria x ananassa HOM05D000010 ORTHO05D004316 2.0e-36 155.6 83 95.2
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 2.2e-30 135.6 100 65.0
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.2e-30 135.6 100 65.0
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 4.8e-30 134.4 100 66.0
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 1.4e-29 132.9 101 65.3
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 9.1e-29 130.2 98 64.3
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 3.3e-26 121.7 101 59.4
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.6e-25 119.4 101 58.4
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 5.2e-24 114.4 101 56.4
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 8.9e-24 113.6 101 56.4
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 4.7e-17 91.3 100 51.0
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 1.5e-15 86.3 91 50.5
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-14 82.4 88 45.5
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 3.7e-14 81.6 93 47.3
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 6.4e-14 80.9 99 38.4
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 2.4e-13 79.0 99 38.4
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 5.4e-13 77.8 85 43.5
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 1.6e-12 76.3 96 37.5
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 3.5e-12 75.1 87 42.5
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 7.8e-12 73.9 86 38.4
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 7.8e-12 73.9 96 36.5
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.7e-11 72.8 96 39.6
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.7e-11 72.8 99 42.4
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 2.3e-11 72.4 81 40.7
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 3.9e-11 71.6 97 37.1
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 8.6e-11 70.5 93 40.9
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 1.5e-10 69.7 95 35.8
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 3.3e-10 68.6 88 42.0
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 3.3e-10 68.6 93 35.5
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 5.6e-10 67.8 70 50.0
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 7.3e-10 67.4 86 36.0
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 7.3e-10 67.4 86 36.0
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.7e-09 64.7 82 36.6
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 4.7e-09 64.7 85 35.3
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 1.1e-08 63.5 70 47.1
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 1.8e-08 62.8 92 38.0
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 5.2e-08 61.2 100 36.0
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 5.2e-08 61.2 78 37.2
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 1.2e-07 60.1 79 35.4
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 1.5e-07 59.7 78 41.0
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 1.5e-07 59.7 101 33.7
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 2.0e-07 59.3 100 34.0
Sabra08G0077500 Salix brachista HOM05D001578 ORTHO05D001207 2.0e-07 59.3 82 34.1
MBI18_g25093_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 2.6e-07 58.9 102 30.4
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 3.4e-07 58.5 94 31.9
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 5.8e-07 57.8 75 34.7
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 5.8e-07 57.8 90 35.6
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 7.5e-07 57.4 77 39.0
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 1.7e-06 56.2 77 29.9
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 1.7e-06 56.2 76 32.9
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 2.2e-06 55.8 86 34.9
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 2.2e-06 55.8 80 35.0
Medtr4g122890 Medicago truncatula HOM05D001578 ORTHO05D001207 3.7e-06 55.1 78 41.0
Thecc.01G319900 Theobroma cacao HOM05D008191 ORTHO05D010044 3.7e-06 55.1 85 36.5
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 4.9e-06 54.7 85 30.6
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.4e-06 54.3 86 31.4
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 6.4e-06 54.3 77 28.6
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 6.4e-06 54.3 88 35.2
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 8.3e-06 53.9 82 34.1
TAR627G0317 Trochodendron aralioides HOM05D008403 ORTHO05D010317 8.3e-06 53.9 75 33.3


User provided reference genes

Program Settings