Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4774 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.7e-296 1021.9 509 100.0
FAN16G1984 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.4e-255 885.9 456 97.4
FAN23G0071 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.5e-249 865.9 466 94.4
FAN05G1459 Fragaria x ananassa HOM05D010142 ORTHO05D012232 4.4e-188 661.8 430 80.9
FAN08G0597 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.3e-163 580.5 336 89.3
FAN14G0448 Fragaria x ananassa HOM05D010142 ORTHO05D012232 7.8e-137 491.5 242 97.1
FAN05G5253 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.9e-135 486.9 260 91.2
FAN02G3705 Fragaria x ananassa HOM05D010142 ORTHO05D012232 7.6e-108 395.2 250 80.4
FAN16G2596 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.8e-77 294.3 164 97.0
RcHm_v2.0_Chr6g0268131 Rosa chinensis HOM05D010142 ORTHO05D012232 4.2e-74 283.1 497 39.8
FAN22G1171 Fragaria x ananassa HOM05D010142 ORTHO05D012232 2.2e-70 270.8 166 82.5
FAN03G0421 Fragaria x ananassa HOM05D010142 ORTHO05D012232 2.3e-48 197.6 100 96.0
FvH4_2g11952 Fragaria vesca HOM05D010142 ORTHO05D012232 3.5e-44 183.7 98 91.8
FAN25G3308 Fragaria x ananassa HOM05D010142 ORTHO05D012232 7.5e-39 166.0 464 30.0
FAN25G1002 Fragaria x ananassa HOM05D010142 ORTHO05D012232 4.5e-36 156.8 483 28.0
FAN05G3432 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.0e-32 145.6 176 40.9
FAN24G0491 Fragaria x ananassa HOM05D010142 ORTHO05D012232 5.2e-32 143.3 98 74.5
RcHm_v2.0_Chr7g0189601 Rosa chinensis HOM05D010142 ORTHO05D012232 3.2e-29 134.0 163 46.0
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 1.2e-28 132.1 468 24.8
FAN02G1861 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.0e-27 127.5 147 43.5
RcHm_v2.0_Chr4g0396211 Rosa chinensis HOM05D009478 ORTHO05D010213 3.4e-23 114.0 254 26.4
RcHm_v2.0_Chr3g0451001 Rosa chinensis HOM05D009478 ORTHO05D010213 5.8e-23 113.2 246 26.8
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 2.4e-21 107.8 261 26.1
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 2.4e-21 107.8 256 27.0
FvH4_2g27910 Fragaria vesca HOM05D004096 ORTHO05D025475 1.6e-20 105.1 190 35.3
FAN09G4395 Fragaria x ananassa HOM05D004096 ORTHO05D025475 1.6e-20 105.1 183 35.5
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 1.0e-19 102.4 261 25.7
FvH4_c19g00030 Fragaria vesca HOM05D011469 ORTHO05D014217 1.0e-19 102.4 265 27.9
FvH4_1g25490 Fragaria vesca HOM05D011469 ORTHO05D014217 1.7e-19 101.7 265 27.9
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 2.3e-19 101.3 258 25.6
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 5.1e-19 100.1 257 25.7
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 6.6e-19 99.8 245 26.5
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 2.1e-17 94.7 257 25.7
FAN14G2992 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.6e-17 94.0 253 26.5
FAN24G2093 Fragaria x ananassa HOM05D004096 ORTHO05D029602 6.2e-17 93.2 177 31.6
RcHm_v2.0_Chr2g0120681 Rosa chinensis HOM05D010142 ORTHO05D012232 1.8e-16 91.7 50 84.0
FAN24G1357 Fragaria x ananassa HOM05D004096 ORTHO05D012232 1.5e-15 88.6 184 33.2
FAN14G4291 Fragaria x ananassa HOM05D010142 ORTHO05D207437 2.2e-14 84.7 40 100.0
FAN23G0656 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.4e-13 82.0 253 25.7
FvH4_c6g00030 Fragaria vesca HOM05D011469 ORTHO05D014217 1.9e-13 81.6 150 33.3
FAN17G1842 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.2e-12 79.0 213 27.7
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 3.5e-12 77.4 244 24.6
FAN28G2991 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.5e-12 77.4 213 27.2
FAN22G0264 Fragaria x ananassa HOM05D004096 ORTHO05D018844 4.6e-12 77.0 148 33.1
FvH4_6g07180 Fragaria vesca HOM05D011469 ORTHO05D014217 7.8e-12 76.3 156 32.1
Medtr4g007830 Medicago truncatula HOM05D011457 ORTHO05D007788 1.7e-11 75.1 223 26.5
FvH4_1g23642 Fragaria vesca HOM05D017852 ORTHO05D010823 2.3e-11 74.7 167 26.9
FvH4_4g16060 Fragaria vesca HOM05D009478 ORTHO05D010213 3.0e-11 74.3 250 22.8
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.0e-11 74.3 230 26.5
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.0e-11 74.3 316 25.6
FvH4_4g09443 Fragaria vesca HOM05D010969 ORTHO05D015656 6.6e-11 73.2 246 26.4
FvH4_6g25720 Fragaria vesca HOM05D009478 ORTHO05D010213 5.6e-10 70.1 223 24.2
FAN25G0749 Fragaria x ananassa HOM05D010969 ORTHO05D010213 5.6e-10 70.1 147 29.9
Lj5g0015857 Lotus japonicus HOM05D009725 ORTHO05D007788 7.3e-10 69.7 187 28.3
FAN16G0995 Fragaria x ananassa HOM05D010969 ORTHO05D015656 9.6e-10 69.3 130 33.8
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 1.2e-09 68.9 323 22.9
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 1.6e-09 68.6 211 27.5
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.7e-09 67.0 292 26.0
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-08 65.9 233 26.6
FAN10G4083 Fragaria x ananassa HOM05D010969 ORTHO05D015656 1.8e-08 65.1 463 21.6
Nitab4.5_0000570g0140 Nicotiana tabacum HOM05D002639 ORTHO05D003094 5.2e-08 63.5 211 26.5
FAN19G1351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.2e-07 62.4 326 24.2
Prupe.2G063700 Prunus persica HOM05D017852 ORTHO05D012232 2.0e-07 61.6 138 28.3
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 7.6e-07 59.7 146 23.3
FvH4_4g15990 Fragaria vesca HOM05D010969 ORTHO05D015656 1.7e-06 58.5 123 29.3
Peaxi162Scf00646g00224 Petunia axillaris HOM05D002639 ORTHO05D003094 1.7e-06 58.5 214 27.6
FAN28G1618 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.2e-06 58.2 132 31.1
FvH4_3g26751 Fragaria vesca HOM05D003860 ORTHO05D004218 2.9e-06 57.8 74 48.6
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.9e-06 57.0 132 31.1
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.4e-06 56.2 132 30.3


User provided reference genes

Program Settings