Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 5.3e-51 204.1 108 100.0
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.2e-50 203.0 108 99.1
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.2e-49 198.7 108 97.2
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 4.9e-49 197.6 108 96.3
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 7.1e-48 193.7 108 95.4
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.2e-42 176.4 110 88.2
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 1.7e-33 146.0 108 71.3
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 3.8e-33 144.8 112 66.1
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 2.1e-31 139.0 112 65.2
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 2.3e-30 135.6 111 66.7
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 8.8e-30 133.7 112 60.7
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 1.1e-29 133.3 110 64.5
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 1.3e-28 129.8 113 62.8
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 2.8e-28 128.6 112 59.8
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 4.8e-28 127.9 112 58.9
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 1.4e-27 126.3 112 59.8
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 2.4e-27 125.6 112 57.1
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 2.4e-27 125.6 112 61.6
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 4.1e-27 124.8 111 60.4
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 5.3e-27 124.4 108 62.0
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 5.3e-27 124.4 108 60.2
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 5.3e-27 124.4 113 62.8
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 5.3e-27 124.4 112 58.9
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 6.9e-27 124.0 112 63.4
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.2e-26 123.2 112 59.8
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 1.2e-26 123.2 112 61.6
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 2.0e-26 122.5 112 58.9
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 5.9e-26 120.9 107 54.2
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 1.7e-25 119.4 112 57.1
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 1.7e-25 119.4 111 55.9
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 6.5e-25 117.5 112 59.8
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 6.5e-25 117.5 112 53.6
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.9e-24 115.9 112 57.1
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 9.4e-24 113.6 110 59.1
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 2.1e-23 112.5 111 55.9
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 3.6e-23 111.7 108 56.5
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 4.7e-23 111.3 113 54.0
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 4.7e-23 111.3 111 54.1
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 6.1e-23 110.9 108 55.6
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 7.9e-23 110.5 112 54.5
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 1.4e-22 109.8 111 55.0
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.8e-22 109.4 111 55.0
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.3e-22 109.0 111 56.8
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 2.3e-22 109.0 115 52.2
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 3.0e-22 108.6 111 57.7
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 3.0e-22 108.6 111 52.3
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 3.9e-22 108.2 113 51.3
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 3.9e-22 108.2 109 53.2
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 5.1e-22 107.8 111 55.0
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 6.7e-22 107.5 110 53.6
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 8.8e-22 107.1 111 54.1
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 8.8e-22 107.1 111 55.9
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 1.1e-21 106.7 113 52.2
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.1e-21 106.7 111 52.3
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 1.5e-21 106.3 108 54.6
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 1.5e-21 106.3 111 55.9
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 2.6e-21 105.5 108 54.6
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 2.6e-21 105.5 112 53.6
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 3.3e-21 105.1 108 53.7
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 3.3e-21 105.1 117 52.1
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 4.4e-21 104.8 112 50.9
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 4.4e-21 104.8 110 50.0
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 5.7e-21 104.4 111 50.5
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 5.7e-21 104.4 111 53.2
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 7.4e-21 104.0 108 53.7
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 9.7e-21 103.6 111 50.5
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 1.3e-20 103.2 112 49.1
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 1.7e-20 102.8 106 52.8
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.7e-20 102.8 106 52.8
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 1.7e-20 102.8 109 53.2
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 3.1e-19 98.6 110 50.0
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 4.1e-19 98.2 111 49.5
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 4.1e-19 98.2 113 46.0
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 1.2e-18 96.7 106 49.1
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 1.5e-18 96.3 111 47.7
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 2.0e-18 95.9 98 57.1
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 3.4e-18 95.1 110 49.1
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 3.4e-18 95.1 115 53.0
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 4.5e-18 94.7 106 51.9
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.3e-17 93.2 112 47.3
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 1.3e-17 93.2 107 50.5
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 2.2e-17 92.4 110 45.5
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 1.1e-16 90.1 108 47.2
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 2.5e-16 89.0 110 45.5
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 2.5e-16 89.0 113 46.0
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 5.5e-16 87.8 110 46.4
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.6e-15 86.3 110 45.5
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 3.6e-15 85.1 109 47.7
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 1.8e-14 82.8 106 45.3
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 8.8e-14 80.5 104 43.3
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.5e-13 79.7 109 41.3
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 1.5e-13 79.7 111 44.1
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 3.1e-11 72.0 110 43.6
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 7.7e-10 67.4 105 37.1
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.8e-09 65.1 92 41.3
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 9.4e-08 60.5 105 33.3
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 1.4e-06 56.6 105 40.0
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.0e-06 55.5 52 55.8


User provided reference genes

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