Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.2e-66 253.4 131 100.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 1.3e-64 249.6 131 98.5
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.3e-64 249.6 131 98.5
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.3e-63 244.6 131 96.2
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.7e-62 241.1 131 96.9
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 9.8e-60 233.4 133 91.7
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.7e-43 179.5 138 73.9
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 4.6e-41 171.4 129 70.5
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 2.3e-40 169.1 125 69.6
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 3.0e-40 168.7 109 79.8
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.1e-39 166.8 129 69.0
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 3.3e-39 165.2 102 82.4
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 5.6e-39 164.5 142 66.2
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 7.3e-39 164.1 100 81.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 9.6e-39 163.7 140 65.0
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 9.6e-39 163.7 138 65.9
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.3e-38 163.3 99 78.8
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.1e-38 162.5 138 65.9
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 3.6e-38 161.8 95 80.0
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 3.6e-38 161.8 142 64.8
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 8.1e-38 160.6 120 70.8
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.1e-37 160.2 99 80.8
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.1e-37 160.2 102 77.5
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.1e-37 160.2 106 77.4
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.4e-37 159.8 138 63.8
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.0e-37 158.3 134 63.4
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 5.3e-37 157.9 100 79.0
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 5.3e-37 157.9 112 70.5
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 5.3e-37 157.9 138 62.3
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 6.9e-37 157.5 137 62.8
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 6.9e-37 157.5 93 81.7
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 9.0e-37 157.1 123 67.5
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 9.0e-37 157.1 109 74.3
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.0e-36 156.0 132 62.9
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.6e-36 155.6 129 63.6
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 2.6e-36 155.6 129 64.3
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.4e-36 155.2 131 63.4
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 4.4e-36 154.8 127 65.4
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 4.4e-36 154.8 125 64.8
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 5.8e-36 154.5 139 62.6
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 7.6e-36 154.1 126 61.9
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 9.9e-36 153.7 92 81.5
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 9.9e-36 153.7 127 68.5
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.3e-35 153.3 125 65.6
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.2e-35 152.5 137 62.8
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 2.9e-35 152.1 93 77.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.8e-35 151.8 137 62.0
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 3.8e-35 151.8 117 68.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 3.8e-35 151.8 117 68.4
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 4.9e-35 151.4 137 61.3
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 4.9e-35 151.4 90 81.1
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 4.9e-35 151.4 127 62.2
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 4.9e-35 151.4 143 60.8
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 6.4e-35 151.0 118 67.8
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 6.4e-35 151.0 118 67.8
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 8.4e-35 150.6 92 82.6
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 8.4e-35 150.6 91 80.2
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.1e-34 150.2 139 55.4
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.1e-34 150.2 105 70.5
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.1e-34 150.2 90 81.1
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.4e-34 149.8 95 81.1
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 2.4e-34 149.1 134 64.2
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 2.4e-34 149.1 94 80.9
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 3.2e-34 148.7 92 78.3
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 3.2e-34 148.7 92 78.3
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 3.2e-34 148.7 116 68.1
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 3.2e-34 148.7 102 72.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 4.2e-34 148.3 125 64.0
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 4.2e-34 148.3 91 79.1
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 5.4e-34 147.9 95 73.7
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 9.3e-34 147.1 94 77.7
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 9.3e-34 147.1 131 64.9
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.2e-33 146.7 110 70.0
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.1e-33 146.0 89 78.7
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 2.1e-33 146.0 124 62.9
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 2.7e-33 145.6 95 72.6
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 2.7e-33 145.6 92 76.1
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 3.5e-33 145.2 89 78.7
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 4.6e-33 144.8 84 85.7
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 4.6e-33 144.8 92 77.2
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 6.0e-33 144.4 94 76.6
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 7.9e-33 144.1 132 60.6
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.0e-32 143.7 136 58.1
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.0e-32 143.7 132 62.9
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.0e-32 143.7 139 59.7
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 2.3e-32 142.5 129 61.2
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 3.0e-32 142.1 84 83.3
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 3.0e-32 142.1 82 84.1
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 3.9e-32 141.7 95 70.5
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 6.6e-32 141.0 118 63.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 8.7e-32 140.6 95 70.5
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.1e-31 140.2 83 79.5
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 1.9e-31 139.4 86 76.7
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 4.3e-31 138.3 134 59.7
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.3e-30 136.7 136 55.9
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 6.2e-30 134.4 125 54.4
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.4e-29 132.5 82 78.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 3.1e-29 132.1 95 68.4
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.5e-28 129.8 83 75.9
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 8.4e-27 124.0 88 65.9
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 3.2e-26 122.1 86 69.8
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 2.1e-22 109.4 118 51.7
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 6.2e-22 107.8 102 62.7
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 1.3e-16 90.1 45 88.9
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.3e-14 81.3 80 52.5
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 2.1e-09 66.2 39 79.5
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.1e-07 60.5 90 46.7


User provided reference genes

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