Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4309 Fragaria x ananassa HOM05D000439 ORTHO05D018837 2.5e-170 602.1 308 100.0
FAN05G4286 Fragaria x ananassa HOM05D000439 ORTHO05D002302 4.4e-159 564.7 356 84.8
FAN09G3453 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.0e-147 526.9 358 79.3
FAN05G0405 Fragaria x ananassa HOM05D000439 ORTHO05D002302 3.3e-146 521.9 449 67.0
FAN09G1744 Fragaria x ananassa HOM05D000439 ORTHO05D002302 3.3e-146 521.9 358 78.8
FvH4_6g04240 Fragaria vesca HOM05D000439 ORTHO05D002302 2.7e-140 502.3 355 77.7
FAN14G2042 Fragaria x ananassa HOM05D000439 ORTHO05D002302 3.5e-140 501.9 356 77.5
RcHm_v2.0_Chr3g0452911 Rosa chinensis HOM05D000439 ORTHO05D002302 5.6e-130 468.0 359 71.3
FAN02G1379 Fragaria x ananassa HOM05D001405 ORTHO05D001264 1.9e-122 443.0 358 69.8
MD00G1051400 Malus domestica HOM05D000439 ORTHO05D002302 2.8e-65 253.1 355 47.3
Prupe.6G334900 Prunus persica HOM05D000439 ORTHO05D002302 2.8e-65 253.1 345 47.5
MD12G1232000 Malus domestica HOM05D000439 ORTHO05D002302 1.7e-62 243.8 350 47.1
MD12G1231700 Malus domestica HOM05D000439 ORTHO05D002302 4.5e-55 219.2 357 45.1
CANSAT54G2200 Cannabis sativa HOM05D000439 ORTHO05D002302 3.3e-21 106.7 401 30.2
CiPaw.07G010900 Carya illinoinensis HOM05D000439 ORTHO05D001363 9.5e-21 105.1 302 32.8
FAN09G4867 Fragaria x ananassa HOM05D000439 ORTHO05D018837 4.9e-17 92.8 80 63.8
FAN05G4124 Fragaria x ananassa HOM05D000439 ORTHO05D018837 8.3e-17 92.0 109 54.1
FAN05G0010 Fragaria x ananassa HOM05D012224 ORTHO05D018837 1.4e-16 91.3 107 55.1
FAN09G3450 Fragaria x ananassa HOM05D000439 ORTHO05D018837 3.2e-16 90.1 80 62.5
FAN02G2374 Fragaria x ananassa HOM05D012224 ORTHO05D017959 7.0e-16 89.0 80 63.8
FAN02G1954 Fragaria x ananassa HOM05D012224 ORTHO05D018837 5.6e-13 79.3 53 75.5
Cfa006500 Carpinus fangiana HOM05D000439 ORTHO05D002302 1.2e-12 78.2 338 29.3
Manes.09G159900 Manihot esculenta HOM05D000439 ORTHO05D002302 1.1e-11 75.1 269 29.7
Ciclev10000462m.g Citrus clementina HOM05D000439 ORTHO05D002302 3.1e-11 73.6 349 27.5
QL03p000917 Quercus lobata HOM05D000439 ORTHO05D002302 4.0e-11 73.2 337 30.6
QL03p001257 Quercus lobata HOM05D000439 ORTHO05D002302 8.9e-11 72.0 337 30.3
Haze_04289 Corylus avellana HOM05D000439 ORTHO05D002302 2.6e-10 70.5 336 28.3
Sp7g13040 Schrenkiella parvula HOM05D000439 ORTHO05D006172 1.4e-08 64.7 78 47.4
THA.LOC104803025 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 1.9e-08 64.3 78 47.4
CARHR221480 Cardamine hirsuta HOM05D000439 ORTHO05D006172 2.4e-08 63.9 78 48.7
ClCG06G006240 Citrullus lanatus HOM05D000439 ORTHO05D006172 2.4e-08 63.9 191 32.5
MELO3C012651.2 Cucumis melo HOM05D000439 ORTHO05D006172 2.4e-08 63.9 191 32.5
CsaV3_7G022490 Cucumis sativus L. HOM05D000439 ORTHO05D006172 2.4e-08 63.9 191 32.5
Peaxi162Scf00092g01013 Petunia axillaris HOM05D000439 ORTHO05D006172 3.2e-08 63.5 153 35.9
Carub.0007s2721 Capsella rubella HOM05D000439 ORTHO05D006172 5.4e-08 62.8 78 46.2
Sp3g20210 Schrenkiella parvula HOM05D000439 ORTHO05D006172 5.4e-08 62.8 78 48.7
CiPaw.01G166100 Carya illinoinensis HOM05D000439 ORTHO05D006172 1.2e-07 61.6 148 35.8
Manes.15G029200 Manihot esculenta HOM05D000439 ORTHO05D006172 1.2e-07 61.6 155 37.4
Nn1g03256 Nelumbo nucifera HOM05D000439 ORTHO05D001363 1.2e-07 61.6 161 32.3
arahy.Tifrunner.gnm1.ann1.JR532J Arachis hypogaea HOM05D000439 ORTHO05D006172 1.6e-07 61.2 180 33.3
Thecc.04G232100 Theobroma cacao HOM05D000439 ORTHO05D006172 1.6e-07 61.2 80 47.5
Nn1g02321 Nelumbo nucifera HOM05D000439 ORTHO05D006172 2.1e-07 60.8 78 48.7
PGSC0003DMG400030083 Solanum tuberosum HOM05D000439 ORTHO05D006172 2.1e-07 60.8 149 34.2
AL7G40950 Arabidopsis lyrata HOM05D000439 ORTHO05D006172 2.7e-07 60.5 78 44.9
AT3G22440 Arabidopsis thaliana HOM05D000439 ORTHO05D006172 2.7e-07 60.5 78 46.2
Carub.0003s2262 Capsella rubella HOM05D000439 ORTHO05D006172 2.7e-07 60.5 78 46.2
MBI19_g33781_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 2.7e-07 60.5 102 41.2
Thhalv10020440m.g Eutrema salsugineum HOM05D000439 ORTHO05D006172 3.5e-07 60.1 78 46.2
Manes.03G178500 Manihot esculenta HOM05D000439 ORTHO05D006172 3.5e-07 60.1 169 33.1
Aa31LG8G9010 Aethionema arabicum HOM05D000439 ORTHO05D006172 4.6e-07 59.7 144 35.4
CARHR098350 Cardamine hirsuta HOM05D000439 ORTHO05D006172 4.6e-07 59.7 78 46.2
Nitab4.5_0000043g0100 Nicotiana tabacum HOM05D000439 ORTHO05D006172 4.6e-07 59.7 148 31.8
QL06p002460 Quercus lobata HOM05D000439 ORTHO05D006172 4.6e-07 59.7 78 47.4
AL3G36750 Arabidopsis lyrata HOM05D000439 ORTHO05D006172 6.0e-07 59.3 78 44.9
arahy.Tifrunner.gnm1.ann1.Y59G7X Arachis hypogaea HOM05D000439 ORTHO05D006172 6.0e-07 59.3 180 33.3
Duzib052G0960 Durio zibethinus HOM05D000439 ORTHO05D006172 6.0e-07 59.3 78 46.2
Sed0018003 Sechium edule HOM05D000439 ORTHO05D006172 6.0e-07 59.3 152 34.9
TAR627G0997 Trochodendron aralioides HOM05D000439 ORTHO05D001363 6.0e-07 59.3 163 30.7
AT4G14900 Arabidopsis thaliana HOM05D000439 ORTHO05D006172 7.8e-07 58.9 78 44.9
COL.COLO4_21479 Corchorus olitorius HOM05D000439 ORTHO05D006172 7.8e-07 58.9 150 35.3
Thhalv10024868m.g Eutrema salsugineum HOM05D000439 ORTHO05D006172 7.8e-07 58.9 78 44.9
Lj5g0001183 Lotus japonicus HOM05D000439 ORTHO05D006172 7.8e-07 58.9 150 32.0
Cfa015646 Carpinus fangiana HOM05D000439 ORTHO05D006172 1.0e-06 58.5 141 34.8
Haze_00899 Corylus avellana HOM05D000439 ORTHO05D006172 1.0e-06 58.5 141 34.8
Dinv26587 Davidia involucrata HOM05D000439 ORTHO05D002302 1.0e-06 58.5 182 32.4
Gorai.005G042900 Gossypium raimondii HOM05D000439 ORTHO05D006172 1.0e-06 58.5 141 36.9
MBI14_g17371_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 1.0e-06 58.5 102 41.2
Nitab4.5_0004258g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006172 1.0e-06 58.5 148 31.1
Prupe.1G013700 Prunus persica HOM05D000439 ORTHO05D006172 1.0e-06 58.5 78 47.4
Sc25g0004360 Simmondsia chinensis HOM05D000439 ORTHO05D006172 1.0e-06 58.5 78 47.4
Solyc09g076050.4 Solanum lycopersicum HOM05D000439 ORTHO05D006172 1.0e-06 58.5 146 34.2
BcaB04g20517 Brassica carinata HOM05D000439 ORTHO05D006172 1.3e-06 58.2 78 46.2
Cc03_g03790 Coffea canephora HOM05D000439 ORTHO05D006172 1.3e-06 58.2 137 35.0
Lj3C734T11 Lonicera japonica HOM05D000439 ORTHO05D006172 1.3e-06 58.2 146 36.3
PGR004G1056 Punica granatum HOM05D000439 ORTHO05D006172 1.3e-06 58.2 148 34.5
TPR.G5544 Trifolium pratense HOM05D000439 ORTHO05D006172 1.3e-06 58.2 190 30.0
Duzib212G0312 Durio zibethinus HOM05D000439 ORTHO05D006172 1.7e-06 57.8 78 46.2
Glyma.05G101800 Glycine max HOM05D000439 ORTHO05D001363 1.7e-06 57.8 78 41.0
MD16G1194000 Malus domestica HOM05D000439 ORTHO05D006172 1.7e-06 57.8 78 46.2
Ciclev10004753m.g Citrus clementina HOM05D000439 ORTHO05D006172 2.3e-06 57.4 165 32.1
Gohir.A09G215900 Gossypium hirsutum HOM05D000439 ORTHO05D006172 2.3e-06 57.4 134 35.8
Gorai.006G239300 Gossypium raimondii HOM05D000439 ORTHO05D006172 2.3e-06 57.4 134 35.8
Potri.008G153000 Populus trichocarpa HOM05D000439 ORTHO05D006172 2.3e-06 57.4 137 34.3
Sabra08G0116600 Salix brachista HOM05D000439 ORTHO05D006172 2.3e-06 57.4 137 34.3
TWI09G0034 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 2.3e-06 57.4 137 34.3
Atru.chr4.2461 Acer truncatum HOM05D000439 ORTHO05D006172 3.0e-06 57.0 147 35.4
Gohir.D02G038900 Gossypium hirsutum HOM05D000439 ORTHO05D006172 3.0e-06 57.0 141 36.9
Sopen09g030890 Solanum pennellii HOM05D000439 ORTHO05D006172 3.0e-06 57.0 147 33.3
THA.LOC104822271 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 3.0e-06 57.0 76 43.4
THA.LOC104809078 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 3.9e-06 56.6 169 30.8
TWI73G0578 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 3.9e-06 56.6 171 30.4
Actinidia23511 Actinidia chinensis HOM05D000439 ORTHO05D006172 5.1e-06 56.2 213 31.9
BcaC09g49175 Brassica carinata HOM05D000439 ORTHO05D006172 5.1e-06 56.2 78 44.9
C01p41830 Brassica napus HOM05D000439 ORTHO05D006172 5.1e-06 56.2 78 44.9
BolC1t04137H Brassica oleracea HOM05D000439 ORTHO05D006172 5.1e-06 56.2 78 44.9
A01p32650 Brassica napus HOM05D000439 ORTHO05D006172 6.6e-06 55.8 78 44.9
BraA01t03393Z Brassica rapa HOM05D000439 ORTHO05D006172 6.6e-06 55.8 78 44.9
Gohir.D09G218300 Gossypium hirsutum HOM05D000439 ORTHO05D006172 6.6e-06 55.8 124 36.3
Hma1.2p1_0602F.1_g187340 Hydrangea macrophylla HOM05D000439 ORTHO05D006172 6.6e-06 55.8 78 47.4
Lalb_Chr21g0304711 Lupinus albus HOM05D000439 ORTHO05D006172 6.6e-06 55.8 209 30.1
SMO364G0047 Selaginella moellendorffii HOM05D000439 ORTHO05D001363 6.6e-06 55.8 90 37.8
Hund12129 Selenicereus undatus HOM05D000439 ORTHO05D006172 6.6e-06 55.8 78 44.9
CAN.G490.11 Capsicum annuum HOM05D000439 ORTHO05D006172 8.6e-06 55.5 143 33.6
Cpa.g.sc58.106 Carica papaya HOM05D000439 ORTHO05D006172 8.6e-06 55.5 148 33.8
Lsat_1_v5_gn_7_67240 Lactuca sativa HOM05D000439 ORTHO05D006172 8.6e-06 55.5 85 44.7
Oeu031230.1 Olea europaea HOM05D000439 ORTHO05D006172 8.6e-06 55.5 209 30.1


User provided reference genes

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