Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 5.7e-56 220.7 113 100.0
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 4.5e-53 211.1 113 96.5
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.1e-51 206.5 113 93.8
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 9.4e-51 203.4 113 92.9
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.6e-50 202.6 114 93.9
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 6.3e-39 164.1 113 77.0
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.0e-25 120.2 116 58.6
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 1.8e-25 119.4 113 54.9
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 9.2e-22 107.1 113 54.0
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 2.7e-21 105.5 113 50.4
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 3.9e-20 101.7 114 50.0
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 9.5e-19 97.1 113 47.8
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 3.6e-18 95.1 112 50.9
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 4.7e-18 94.7 113 47.8
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 4.7e-18 94.7 117 52.1
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 1.1e-17 93.6 115 48.7
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 1.1e-17 93.6 113 46.0
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 2.3e-17 92.4 120 48.3
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 4.0e-17 91.7 120 46.7
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 5.2e-17 91.3 110 48.2
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 6.8e-17 90.9 120 45.8
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 2.0e-16 89.4 121 49.6
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 2.0e-16 89.4 113 45.1
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 2.6e-16 89.0 113 47.8
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 2.6e-16 89.0 115 49.6
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 4.4e-16 88.2 113 45.1
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 1.3e-15 86.7 114 43.9
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 1.3e-15 86.7 115 47.0
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 1.3e-15 86.7 119 47.9
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 1.7e-15 86.3 117 41.0
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.2e-15 85.9 107 48.6
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 2.2e-15 85.9 107 48.6
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 4.9e-15 84.7 114 50.0
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.9e-14 82.8 107 47.7
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 4.1e-14 81.6 115 43.5
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 7.0e-14 80.9 119 45.4
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 1.2e-13 80.1 116 44.0
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.6e-13 79.7 116 44.0
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 1.6e-13 79.7 113 46.0
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 1.6e-13 79.7 110 47.3
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 2.7e-13 79.0 117 40.2
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 4.6e-13 78.2 118 44.9
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 1.0e-12 77.0 114 43.0
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 1.7e-12 76.3 121 41.3
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 2.3e-12 75.9 160 35.0
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 3.0e-12 75.5 115 42.6
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 3.9e-12 75.1 116 44.8
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 5.0e-12 74.7 115 43.5
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 4.3e-11 71.6 113 41.6
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 5.6e-11 71.2 113 41.6
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 5.6e-11 71.2 114 43.9
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 9.5e-11 70.5 113 43.4
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 1.2e-10 70.1 116 39.7
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 2.8e-10 68.9 113 42.5
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 3.6e-10 68.6 115 42.6
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 4.7e-10 68.2 113 43.4
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 4.7e-10 68.2 115 47.0
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 8.1e-10 67.4 115 41.7
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 8.1e-10 67.4 119 36.1
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 1.4e-09 66.6 91 45.1
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.8e-09 66.2 106 39.6
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.8e-09 66.2 117 41.0
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 2.3e-09 65.9 118 39.8
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 3.1e-09 65.5 125 39.2
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 3.1e-09 65.5 50 66.0
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 4.0e-09 65.1 101 41.6
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 6.8e-09 64.3 114 36.8
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 2.0e-08 62.8 114 36.8
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 3.4e-08 62.0 114 36.8
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 9.9e-08 60.5 105 37.1
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 2.2e-07 59.3 115 42.6
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 1.1e-06 57.0 58 50.0
MBI04_g06582_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.4e-06 56.6 92 37.0


User provided reference genes

Program Settings