Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 0.0e+00 1119.4 579 100.0
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.4e-307 1058.9 568 95.8
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.3e-302 1041.6 559 95.7
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 4.2e-280 967.6 513 97.1
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 2.7e-258 895.2 555 84.9
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 8.5e-172 607.8 551 61.5
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 3.6e-170 602.4 553 60.0
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 1.5e-168 597.0 567 57.3
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 7.2e-163 578.2 564 58.2
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.1e-160 570.9 550 56.7
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 3.3e-160 569.3 556 57.0
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 1.1e-158 564.3 548 57.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 4.5e-157 558.9 564 55.0
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 1.3e-156 557.4 578 54.8
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 1.9e-155 553.5 557 55.5
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 6.1e-154 548.5 529 56.5
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 6.1e-154 548.5 541 57.3
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 5.7e-152 542.0 558 54.5
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.7e-148 530.4 379 72.6
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 3.8e-148 529.3 580 52.2
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 6.5e-148 528.5 562 53.0
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 3.2e-147 526.2 542 54.1
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.6e-146 523.9 498 58.6
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 2.7e-146 523.1 574 52.3
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.8e-145 520.4 538 53.7
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.2e-144 517.7 541 54.7
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 1.3e-143 514.2 568 51.4
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 1.7e-143 513.8 565 52.7
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.2e-143 513.5 561 51.7
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 1.1e-142 511.1 556 51.6
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 1.4e-142 510.8 560 52.1
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 1.8e-142 510.4 566 52.7
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.4e-142 510.0 556 51.6
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 4.1e-142 509.2 567 50.8
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.2e-141 507.7 577 50.4
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 1.6e-141 507.3 556 51.8
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 2.7e-141 506.5 560 51.2
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 7.7e-141 505.0 561 53.1
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.0e-140 504.6 561 51.3
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 1.3e-140 504.2 566 50.5
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 1.7e-140 503.8 572 51.0
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 6.6e-140 501.9 548 51.5
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 1.5e-139 500.7 560 50.7
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.9e-139 500.4 605 49.3
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 3.3e-139 499.6 546 52.7
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 4.3e-139 499.2 556 50.7
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 5.6e-139 498.8 592 49.5
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 7.3e-139 498.4 544 52.8
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 1.0e-137 494.6 556 52.9
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.4e-137 494.2 545 52.8
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 1.8e-137 493.8 528 53.0
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.8e-137 493.8 552 50.7
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.0e-137 493.0 558 50.9
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 1.2e-136 491.1 547 51.9
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 7.5e-136 488.4 544 50.2
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 5.4e-134 482.3 557 49.0
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 4.6e-133 479.2 565 49.6
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 4.6e-133 479.2 576 46.9
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 3.0e-132 476.5 563 49.0
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 2.5e-131 473.4 555 49.9
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.3e-131 473.0 520 52.9
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 3.6e-130 469.5 522 51.7
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 6.2e-130 468.8 564 49.6
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 6.2e-130 468.8 564 49.6
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 3.4e-128 463.0 559 50.3
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 2.2e-119 433.7 464 50.4
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 1.4e-118 431.0 557 47.8
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.4e-118 431.0 535 46.0
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.3e-116 424.5 554 47.8
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 8.4e-111 405.2 570 43.5
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.6e-109 401.0 560 46.1
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 5.4e-102 375.9 378 55.3
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 2.7e-101 373.6 579 39.6
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.0e-100 370.2 366 54.1
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 2.0e-96 357.5 306 63.4
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 2.3e-92 344.0 540 43.0
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.1e-91 341.7 574 38.7
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.1e-91 341.7 385 53.8
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.6e-90 337.8 501 40.7
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 2.4e-86 323.9 383 51.2
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.3e-84 318.2 372 50.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.2e-80 305.1 557 36.1
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 9.3e-78 295.4 380 49.7
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.0e-63 248.8 568 31.7
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 4.7e-45 186.8 191 52.9
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 1.2e-35 155.6 166 52.4
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 1.4e-33 148.7 122 60.7
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 2.2e-31 141.4 194 45.4
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 3.5e-24 117.5 130 50.0
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 5.0e-23 113.6 128 48.4
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.4e-09 68.2 84 44.0


User provided reference genes

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