Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4098 Fragaria x ananassa HOM05D000430 ORTHO05D000305 1.0e-44 183.0 88 100.0
FvH4_6g46780 Fragaria vesca HOM05D000430 ORTHO05D000305 1.1e-09 66.6 44 75.0
FAN14G5486 Fragaria x ananassa HOM05D000430 ORTHO05D000305 1.1e-09 66.6 44 75.0
RcHm_v2.0_Chr1g0317151 Rosa chinensis HOM05D000430 ORTHO05D000305 1.1e-09 66.6 46 69.6
RcHm_v2.0_Chr2g0165751 Rosa chinensis HOM05D000430 ORTHO05D000305 1.8e-09 65.9 46 73.9
RcHm_v2.0_Chr2g0165781 Rosa chinensis HOM05D000430 ORTHO05D000305 1.8e-09 65.9 45 77.8
FvH4_6g46742 Fragaria vesca HOM05D000430 ORTHO05D000305 2.4e-09 65.5 46 73.9
FvH4_7g01310 Fragaria vesca HOM05D000430 ORTHO05D000305 2.4e-09 65.5 46 73.9
FvH4_7g01410 Fragaria vesca HOM05D000430 ORTHO05D000305 3.1e-09 65.1 46 73.9
FAN06G3520 Fragaria x ananassa HOM05D000430 ORTHO05D000305 3.1e-09 65.1 46 73.9
FAN05G4947 Fragaria x ananassa HOM05D000430 ORTHO05D000305 4.1e-09 64.7 64 56.2
RcHm_v2.0_Chr1g0317141 Rosa chinensis HOM05D000430 ORTHO05D000305 4.1e-09 64.7 48 66.7
FAN01G0820 Fragaria x ananassa HOM05D000430 ORTHO05D000305 1.5e-08 62.8 46 71.7
FAN05G5263 Fragaria x ananassa HOM05D000430 ORTHO05D000305 4.5e-08 61.2 56 58.9
RcHm_v2.0_Chr5g0029331 Rosa chinensis HOM05D000430 ORTHO05D000305 1.0e-07 60.1 45 66.7
FvH4_6g48750 Fragaria vesca HOM05D000430 ORTHO05D000305 1.3e-07 59.7 45 68.9
FAN14G0953 Fragaria x ananassa HOM05D000430 ORTHO05D000305 1.3e-07 59.7 45 68.9
RcHm_v2.0_Chr1g0317211 Rosa chinensis HOM05D000430 ORTHO05D000305 1.3e-07 59.7 47 68.1
MD09G1067500 Malus domestica HOM05D000430 ORTHO05D000305 1.7e-07 59.3 45 66.7
MD17G1061000 Malus domestica HOM05D000430 ORTHO05D000305 2.9e-07 58.5 44 63.6
MD17G1060600 Malus domestica HOM05D000430 ORTHO05D000305 5.0e-07 57.8 44 65.9
Prupe.3G252900 Prunus persica HOM05D000430 ORTHO05D000305 8.5e-07 57.0 44 63.6
Prupe.3G253100 Prunus persica HOM05D000430 ORTHO05D000305 8.5e-07 57.0 44 63.6
FAN05G2183 Fragaria x ananassa HOM05D000430 ORTHO05D000305 1.4e-06 56.2 45 64.4
FAN05G2546 Fragaria x ananassa HOM05D000430 ORTHO05D000305 1.4e-06 56.2 45 64.4
RcHm_v2.0_Chr5g0029321 Rosa chinensis HOM05D000430 ORTHO05D000305 1.4e-06 56.2 44 61.4
Ciclev10020021m.g Citrus clementina HOM05D000430 ORTHO05D000305 1.9e-06 55.8 45 62.2
FvH4_6g46750 Fragaria vesca HOM05D000430 ORTHO05D000305 2.5e-06 55.5 43 67.4
FvH4_6g48770 Fragaria vesca HOM05D000430 ORTHO05D000305 2.5e-06 55.5 45 62.2
FAN09G2191 Fragaria x ananassa HOM05D000430 ORTHO05D000305 2.5e-06 55.5 43 67.4
FAN14G5470 Fragaria x ananassa HOM05D000430 ORTHO05D000305 2.5e-06 55.5 45 62.2
MD17G1071400 Malus domestica HOM05D000430 ORTHO05D000305 2.5e-06 55.5 43 67.4
MD17G1071300 Malus domestica HOM05D000430 ORTHO05D000305 3.2e-06 55.1 44 63.6
RcHm_v2.0_Chr2g0165731 Rosa chinensis HOM05D000430 ORTHO05D000305 4.2e-06 54.7 43 65.1
Ciclev10004906m.g Citrus clementina HOM05D000430 ORTHO05D000305 9.4e-06 53.5 44 59.1
FvH4_6g46770 Fragaria vesca HOM05D000430 ORTHO05D000305 9.4e-06 53.5 43 67.4
RcHm_v2.0_Chr1g0334681 Rosa chinensis HOM05D000430 ORTHO05D000305 9.4e-06 53.5 46 60.9


User provided reference genes

Program Settings