Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.8e-102 375.9 194 100.0
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.5e-101 371.3 194 99.0
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.3e-87 324.3 188 93.6
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.6e-85 318.9 202 86.1
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.6e-85 318.9 202 86.1
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.9e-83 312.8 166 98.8
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 5.5e-83 311.2 190 89.5
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.4e-64 248.4 192 73.4
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 3.1e-62 242.3 192 70.8
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.1e-62 241.9 192 70.8
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 3.6e-58 228.8 134 89.6
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.8e-57 224.6 134 88.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.6e-52 207.6 131 80.9
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.5e-48 196.8 134 76.1
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 1.7e-47 193.4 135 74.1
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 2.9e-47 192.6 138 76.1
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 3.7e-47 192.2 138 78.3
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 8.3e-47 191.0 136 76.5
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 1.8e-46 189.9 134 73.9
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 2.4e-46 189.5 137 75.9
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 3.2e-46 189.1 138 73.9
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 3.2e-46 189.1 138 74.6
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 4.1e-46 188.7 136 77.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 4.1e-46 188.7 147 70.7
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 9.2e-46 187.6 140 74.3
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 9.2e-46 187.6 136 76.5
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.6e-45 186.8 137 73.0
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 1.6e-45 186.8 136 72.8
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 2.0e-45 186.4 137 73.0
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.0e-45 186.4 136 72.8
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.0e-45 186.4 139 74.1
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.7e-45 186.0 105 86.7
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.7e-45 186.0 141 70.9
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 2.7e-45 186.0 137 74.5
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 1.0e-44 184.1 145 69.0
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.0e-44 184.1 136 73.5
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.0e-44 184.1 136 72.1
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.3e-44 183.7 145 68.3
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.3e-44 183.7 143 72.0
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 1.7e-44 183.3 136 73.5
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 3.0e-44 182.6 134 73.9
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 3.0e-44 182.6 136 72.1
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 3.9e-44 182.2 135 74.1
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 3.9e-44 182.2 134 72.4
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 3.9e-44 182.2 138 75.4
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 5.0e-44 181.8 138 73.2
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 5.0e-44 181.8 138 72.5
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 1.9e-43 179.9 134 68.7
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.5e-43 179.5 164 64.6
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 4.3e-43 178.7 138 72.5
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 4.3e-43 178.7 136 71.3
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 7.3e-43 177.9 134 70.9
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 9.5e-43 177.6 135 68.1
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 1.2e-42 177.2 136 72.1
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.6e-42 176.8 136 69.9
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 2.1e-42 176.4 136 71.3
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.8e-42 176.0 137 72.3
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 3.6e-42 175.6 136 69.1
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 3.6e-42 175.6 113 84.1
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 3.6e-42 175.6 135 68.9
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 3.6e-42 175.6 159 63.5
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 4.7e-42 175.3 135 68.1
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 4.7e-42 175.3 135 68.9
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 6.2e-42 174.9 132 75.8
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.0e-41 174.1 136 72.1
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.4e-41 173.7 189 53.4
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 1.8e-41 173.3 137 72.3
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.8e-41 173.3 136 71.3
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.8e-41 173.3 136 71.3
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 1.8e-41 173.3 136 72.1
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 1.8e-41 173.3 136 69.9
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 4.0e-41 172.2 136 69.9
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 6.8e-41 171.4 137 69.3
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 6.8e-41 171.4 135 67.4
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 6.8e-41 171.4 136 66.9
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.9e-41 171.0 138 68.1
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 8.9e-41 171.0 138 69.6
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.2e-40 170.6 130 71.5
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 1.2e-40 170.6 138 69.6
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.5e-40 170.2 106 80.2
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 2.0e-40 169.9 113 76.1
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 2.6e-40 169.5 136 67.6
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 2.6e-40 169.5 137 67.2
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 5.8e-40 168.3 105 78.1
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 5.8e-40 168.3 105 78.1
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 5.8e-40 168.3 105 78.1
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 5.8e-40 168.3 105 78.1
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 5.8e-40 168.3 140 67.9
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 7.5e-40 167.9 138 69.6
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 7.5e-40 167.9 135 67.4
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 7.5e-40 167.9 137 69.3
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 2.9e-39 166.0 126 68.3
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.9e-39 166.0 98 85.7
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 4.9e-39 165.2 137 63.5
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 4.9e-39 165.2 137 66.4
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 1.1e-38 164.1 101 82.2
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.9e-38 163.3 93 82.8
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 1.9e-38 163.3 141 63.8
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.9e-38 163.3 136 65.4
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 4.1e-38 162.2 172 54.1
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 5.4e-38 161.8 133 66.2
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 7.0e-38 161.4 90 84.4
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 9.2e-38 161.0 106 77.4
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 9.2e-38 161.0 129 67.4
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.2e-37 160.6 131 65.6
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.6e-37 160.2 92 83.7
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 1.6e-37 160.2 117 71.8
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 4.6e-37 158.7 136 66.2
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.0e-37 158.3 106 77.4
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.0e-36 157.5 106 76.4
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 2.3e-36 156.4 120 69.2
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 2.3e-36 156.4 134 66.4
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 5.0e-36 155.2 92 80.4
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 8.6e-36 154.5 135 60.7
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.5e-35 153.7 92 79.3
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.6e-35 151.8 92 79.3
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 7.3e-35 151.4 100 76.0
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 7.3e-35 151.4 124 69.4
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 9.5e-35 151.0 128 65.6
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 2.1e-34 149.8 134 61.2
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 8.1e-34 147.9 104 72.1
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 5.2e-33 145.2 104 69.2
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 7.5e-32 141.4 137 56.2
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 4.1e-30 135.6 90 73.3
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 2.3e-28 129.8 113 59.3
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 7.3e-27 124.8 123 62.6
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-26 124.0 134 57.5
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.5e-24 117.1 100 63.0
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 3.5e-21 105.9 126 46.8
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.7e-20 103.6 107 49.5
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 3.9e-20 102.4 92 55.4
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 4.3e-19 99.0 91 51.6
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 2.1e-18 96.7 108 48.1
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 3.4e-16 89.4 51 80.4
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.3e-12 76.6 62 62.9
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 2.8e-10 69.7 98 41.8
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 6.2e-10 68.6 139 33.1
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 3.1e-09 66.2 112 46.4
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 6.4e-07 58.5 95 35.8


User provided reference genes

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