Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 6.7e-258 893.6 500 100.0
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.2e-228 794.7 465 96.3
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 8.0e-211 737.3 460 92.6
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.5e-209 733.0 460 87.6
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 3.6e-187 658.7 460 83.0
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 1.5e-124 450.7 459 61.4
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 8.5e-120 434.9 459 53.6
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.1e-118 430.3 459 53.4
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 4.2e-111 406.0 459 52.7
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 3.6e-110 402.9 374 58.6
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 6.1e-110 402.1 458 50.0
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 1.0e-109 401.4 458 50.0
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 5.2e-109 399.1 458 51.7
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 1.5e-108 397.5 402 54.2
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 7.5e-108 395.2 459 54.9
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 9.8e-108 394.8 459 49.0
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 1.4e-106 391.0 459 48.6
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 4.1e-106 389.4 460 53.9
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 3.5e-105 386.3 461 47.7
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 5.9e-105 385.6 454 54.0
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 2.9e-104 383.3 398 55.0
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 7.2e-103 378.6 458 46.9
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 9.4e-103 378.3 459 51.4
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 2.1e-102 377.1 460 47.2
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.7e-102 375.9 447 49.2
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 1.8e-101 374.0 542 46.3
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 3.4e-100 369.8 459 48.1
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 2.2e-99 367.1 456 50.2
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.2e-99 367.1 460 48.0
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 2.2e-99 367.1 460 48.0
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 8.3e-99 365.2 460 46.7
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 1.1e-98 364.8 401 51.6
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 2.0e-97 360.5 395 51.6
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 2.7e-97 360.1 459 47.3
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 1.7e-96 357.5 459 43.8
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.9e-96 356.7 610 39.3
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 3.6e-94 349.7 459 44.0
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 4.7e-94 349.4 450 45.1
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 2.3e-93 347.1 496 43.5
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 3.0e-93 346.7 469 42.9
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 4.0e-93 346.3 459 43.6
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 1.5e-92 344.4 457 47.9
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 3.4e-92 343.2 458 42.4
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 5.7e-92 342.4 460 49.8
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 7.5e-92 342.0 459 42.7
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 2.9e-91 340.1 459 49.0
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 3.7e-91 339.7 460 46.7
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 3.2e-90 336.7 447 43.8
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 5.4e-90 335.9 459 42.7
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.2e-89 334.7 446 43.0
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 2.7e-89 333.6 458 41.3
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 3.5e-89 333.2 459 42.0
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 5.9e-89 332.4 461 49.2
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 7.8e-89 332.0 446 43.0
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 1.0e-88 331.6 592 39.2
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 2.3e-88 330.5 391 48.8
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 2.3e-88 330.5 457 42.2
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 2.9e-88 330.1 459 42.0
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 2.9e-88 330.1 457 42.0
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 5.0e-88 329.3 487 40.5
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 5.6e-87 325.9 458 43.2
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 2.8e-86 323.6 458 42.4
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 2.8e-86 323.6 464 42.2
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 3.6e-86 323.2 459 44.0
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 4.7e-86 322.8 466 42.3
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 3.1e-85 320.1 459 40.7
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 5.2e-85 319.3 468 40.8
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 5.2e-85 319.3 458 42.8
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 6.8e-85 318.9 475 41.1
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 6.8e-85 318.9 475 41.1
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 1.2e-84 318.2 459 43.4
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.0e-84 317.4 344 52.6
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 4.4e-84 316.2 475 41.1
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 9.8e-84 315.1 458 42.6
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 3.2e-82 310.1 458 42.1
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 3.2e-82 310.1 459 40.1
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 9.2e-82 308.5 461 41.0
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.3e-80 304.7 458 44.5
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 3.0e-80 303.5 458 41.9
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 8.6e-80 302.0 458 45.0
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 2.5e-79 300.4 325 52.6
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 7.3e-79 298.9 461 41.2
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 7.3e-79 298.9 463 40.4
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 1.6e-78 297.7 517 36.9
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 8.1e-78 295.4 459 41.6
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 3.1e-77 293.5 461 38.4
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 4.0e-77 293.1 463 44.9
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 1.2e-76 291.6 459 39.9
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 1.5e-76 291.2 459 41.8
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 2.6e-76 290.4 459 43.8
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 7.5e-76 288.9 460 39.3
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 8.3e-75 285.4 459 39.4
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 7.1e-74 282.3 459 41.8
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.2e-73 281.6 403 43.9
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 2.1e-73 280.8 463 40.2
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.7e-73 280.4 457 44.0
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 6.0e-73 279.3 484 36.4
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 7.8e-73 278.9 459 39.4
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 3.3e-71 273.5 307 51.5
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 2.3e-69 267.3 395 39.7
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 2.0e-68 264.2 449 43.4
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.6e-68 263.8 321 46.7
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 7.6e-68 262.3 404 39.4
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.4e-66 258.1 403 40.9
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 5.4e-66 256.1 449 37.6
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 7.8e-65 252.3 474 36.1
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 7.8e-65 252.3 247 50.6
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 1.7e-64 251.1 367 41.7
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 3.8e-59 233.4 460 34.6
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 7.1e-58 229.2 309 42.7
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 2.3e-56 224.2 467 35.3
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 5.6e-55 219.5 367 39.5
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 7.6e-52 209.1 453 35.1
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 2.4e-50 204.1 486 31.9
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 3.2e-50 203.8 459 35.5
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.3e-48 197.6 446 35.2
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 3.3e-47 193.7 250 42.0
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 2.1e-46 191.0 407 32.7
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 4.8e-46 189.9 220 45.9
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.8e-45 188.0 205 48.3
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 9.0e-45 185.7 327 38.8
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.4e-42 178.3 464 28.9
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 1.2e-41 175.3 252 39.7
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.6e-39 166.4 435 31.5
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 1.1e-37 162.2 220 47.7
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 1.5e-36 158.3 243 44.0
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 4.5e-36 156.8 206 39.8
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 2.1e-33 147.9 361 31.6
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 9.0e-29 132.5 404 27.5
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 7.6e-28 129.4 378 29.1
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 2.9e-27 127.5 158 41.8
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 7.2e-26 122.9 174 44.8
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 1.6e-25 121.7 127 47.2
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 1.6e-25 121.7 97 59.8
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 9.7e-23 112.5 243 29.6
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 8.5e-19 99.4 100 49.0
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.2e-18 97.1 116 44.8
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.5e-18 96.7 99 47.5
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 2.1e-17 94.7 164 38.4
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 7.9e-17 92.8 379 25.1
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 1.8e-16 91.7 165 36.4
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 6.7e-16 89.7 149 37.6
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 4.1e-13 80.5 89 51.7
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 5.3e-13 80.1 74 58.1
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 4.5e-12 77.0 74 54.1
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 4.5e-12 77.0 137 40.1
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 1.4e-10 72.0 207 29.0
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 6.3e-06 56.6 107 29.9


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