Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4081 Fragaria x ananassa HOM05D005860 ORTHO05D006977 1.9e-180 636.3 500 100.0
FvH4_6g53060 Fragaria vesca HOM05D005860 ORTHO05D006977 3.5e-174 615.5 500 98.0
FAN09G0694 Fragaria x ananassa HOM05D005860 ORTHO05D006977 3.6e-171 605.5 500 97.0
RcHm_v2.0_Chr2g0174841 Rosa chinensis HOM05D005860 ORTHO05D006977 7.9e-158 561.2 505 91.9
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 2.4e-154 549.7 484 83.9
MD17G1015100 Malus domestica HOM05D005860 ORTHO05D006977 2.6e-121 439.9 458 85.8
Eucgr.J02311 Eucalyptus grandis HOM05D005860 ORTHO05D006977 5.4e-106 389.0 475 65.5
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 4.2e-103 379.4 450 76.7
COL.COLO4_03595 Corchorus olitorius HOM05D005860 ORTHO05D006977 7.2e-103 378.6 447 77.9
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 1.2e-102 377.9 446 65.9
Atru.chr4.382 Acer truncatum HOM05D005860 ORTHO05D006977 3.0e-101 373.2 476 68.1
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 4.4e-100 369.4 448 67.2
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 9.8e-100 368.2 459 67.5
Cpa.g.sc171.37 Carica papaya HOM05D005860 ORTHO05D006977 6.3e-99 365.5 467 70.9
Potri.017G067600 Populus trichocarpa HOM05D005860 ORTHO05D006977 1.4e-98 364.4 463 69.3
Duzib116G0811 Durio zibethinus HOM05D005860 ORTHO05D006977 1.2e-97 361.3 450 69.6
Haze_14838 Corylus avellana HOM05D005860 ORTHO05D006977 1.6e-97 360.9 519 64.9
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 2.3e-96 357.1 464 68.8
Lj2g0013553 Lotus japonicus HOM05D005860 ORTHO05D006977 1.1e-95 354.8 470 71.7
Sabra17G0063700 Salix brachista HOM05D005860 ORTHO05D006977 2.5e-95 353.6 460 67.2
Hma1.2p1_1219F.1_g267900 Hydrangea macrophylla HOM05D005860 ORTHO05D006977 3.3e-95 353.2 477 66.5
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 4.2e-95 352.8 461 74.4
CsaV3_6G042570 Cucumis sativus L. HOM05D005860 ORTHO05D006977 7.2e-95 352.1 450 75.1
Sed0023405 Sechium edule HOM05D005860 ORTHO05D006977 7.2e-95 352.1 448 73.2
Oeu058768.1 Olea europaea HOM05D005860 ORTHO05D006977 1.6e-94 350.9 463 65.9
VMungo0464G0018 Vigna mungo HOM05D005860 ORTHO05D006977 1.6e-94 350.9 447 75.6
SalBow1G3206 Salvia bowleyana HOM05D005860 ORTHO05D006977 3.6e-94 349.7 459 73.0
SalBow7G2829 Salvia bowleyana HOM05D005860 ORTHO05D006977 3.6e-94 349.7 459 73.0
Ciclev10011572m.g Citrus clementina HOM05D005860 ORTHO05D006977 1.0e-93 348.2 464 68.3
ClCG01G016270 Citrullus lanatus HOM05D005860 ORTHO05D006977 1.4e-93 347.8 450 73.8
CAN.G473.79 Capsicum annuum HOM05D005860 ORTHO05D006977 4.0e-93 346.3 461 67.0
Peaxi162Scf00420g00442 Petunia axillaris HOM05D005860 ORTHO05D006977 4.0e-93 346.3 456 69.1
Phvul.004G147000 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 4.0e-93 346.3 447 75.4
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 7.5e-92 342.0 427 70.7
PGR083G1804 Punica granatum HOM05D005860 ORTHO05D006977 7.5e-92 342.0 451 53.0
Sopen02g038590 Solanum pennellii HOM05D005860 ORTHO05D006977 7.5e-92 342.0 458 67.9
CANSAT64G0040 Cannabis sativa HOM05D005860 ORTHO05D006977 9.8e-92 341.7 455 69.7
Nitab4.5_0002887g0110 Nicotiana tabacum HOM05D005860 ORTHO05D006977 9.8e-92 341.7 460 68.0
Solyc02g093940.3 Solanum lycopersicum HOM05D005860 ORTHO05D006977 2.2e-91 340.5 458 67.9
arahy.Tifrunner.gnm1.ann1.SB3XQV Arachis hypogaea HOM05D005860 ORTHO05D006977 2.9e-91 340.1 447 72.0
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 3.7e-91 339.7 427 70.5
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 4.9e-91 339.3 442 68.6
PGSC0003DMG400020220 Solanum tuberosum HOM05D005860 ORTHO05D006977 4.9e-91 339.3 458 67.5
arahy.Tifrunner.gnm1.ann1.WZ54PF Arachis hypogaea HOM05D005860 ORTHO05D006977 1.8e-90 337.4 447 72.0
MELO3C007497.2 Cucumis melo HOM05D005860 ORTHO05D006977 1.8e-90 337.4 437 75.1
TWI56G1326 Tripterygium wilfordii HOM05D005860 ORTHO05D006977 2.4e-90 337.0 451 69.8
Glyma.05G075600 Glycine max HOM05D005860 ORTHO05D006977 3.2e-90 336.7 453 69.1
Lj7A609T51 Lonicera japonica HOM05D005860 ORTHO05D006977 4.1e-90 336.3 460 66.3
CSS0015596 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 5.4e-90 335.9 458 71.0
CSS0028115 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 5.4e-90 335.9 457 71.1
Aqoxy5G03469 Aquilegia oxysepala HOM05D005860 ORTHO05D006977 5.9e-89 332.4 446 72.4
Nitab4.5_0009757g0020 Nicotiana tabacum HOM05D005860 ORTHO05D006977 5.9e-89 332.4 457 67.6
Cc02_g00900 Coffea canephora HOM05D005860 ORTHO05D006977 1.0e-88 331.6 491 60.3
TAR629G2046 Trochodendron aralioides HOM05D005860 ORTHO05D006977 1.0e-88 331.6 447 63.3
Glyma.19G075100 Glycine max HOM05D005860 ORTHO05D006977 3.9e-88 329.7 447 68.5
Phvul.004G055500 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 3.9e-88 329.7 446 66.4
PSO782G4049 Papaver somniferum HOM05D005860 ORTHO05D006977 8.6e-88 328.6 460 66.5
Migut.K01447 Erythranthe guttata HOM05D005860 ORTHO05D006977 1.1e-87 328.2 461 64.2
Sc16g0003100 Simmondsia chinensis HOM05D005860 ORTHO05D006977 3.3e-87 326.6 473 66.2
Lalb_Chr02g0157831 Lupinus albus HOM05D005860 ORTHO05D006977 6.8e-85 318.9 462 70.3
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 1.5e-84 317.8 458 68.8
PSO063G3212 Papaver somniferum HOM05D005860 ORTHO05D006977 4.4e-84 316.2 448 66.5
PSO478G3943 Papaver somniferum HOM05D005860 ORTHO05D006977 9.8e-84 315.1 448 67.2
TPR.G5727 Trifolium pratense HOM05D001503 ORTHO05D003820 9.8e-84 315.1 449 66.1
ATR0686G114 Amborella trichopoda HOM05D005860 ORTHO05D006977 1.3e-83 314.7 445 65.6
Prupe.3G302700 Prunus persica HOM05D005860 ORTHO05D006977 1.3e-83 314.7 366 88.0
PSO017G5933 Papaver somniferum HOM05D005860 ORTHO05D006977 2.9e-83 313.5 448 68.1
DCAR_021767 Daucus carota HOM05D005860 ORTHO05D006977 6.4e-83 312.4 437 72.5
THA.LOC104825612 Tarenaya hassleriana HOM05D005860 ORTHO05D006977 8.3e-83 312.0 463 63.5
SGA_v2.0_scaffold7G03541 Striga asiatica HOM05D005860 ORTHO05D006977 1.1e-82 311.6 440 64.3
Sed0015041 Sechium edule HOM05D005860 ORTHO05D006977 1.4e-82 311.2 447 61.3
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 5.4e-82 309.3 362 77.6
Medtr2g034600 Medicago truncatula HOM05D005860 ORTHO05D006977 2.7e-81 307.0 450 66.4
Psat1g161720 Pisum sativum HOM05D005860 ORTHO05D006977 1.5e-79 301.2 481 63.0
Ah.03g142080 Amaranthus hybridus HOM05D005860 ORTHO05D006977 9.5e-79 298.5 442 69.7
CiPaw.01G128900 Carya illinoinensis HOM05D005860 ORTHO05D006977 2.3e-77 293.9 452 70.4
EL10Ac1g02122 Beta vulgaris HOM05D005860 ORTHO05D006977 4.0e-77 293.1 433 68.8
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 4.0e-77 293.1 433 65.6
unitig_0.g543 Utricularia gibba HOM05D005860 ORTHO05D006977 1.5e-76 291.2 457 63.9
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 1.7e-75 287.7 451 64.5
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 1.7e-75 287.7 435 65.3
Hund24045 Selenicereus undatus HOM05D005860 ORTHO05D006977 2.2e-75 287.3 458 64.2
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 3.7e-75 286.6 433 66.1
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 3.7e-75 286.6 464 62.9
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 1.6e-73 281.2 433 64.7
Nn4g22386 Nelumbo nucifera HOM05D005860 ORTHO05D006977 2.1e-73 280.8 357 58.0
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 3.5e-73 280.0 446 63.0
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 7.8e-73 278.9 431 65.9
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 1.3e-72 278.1 426 66.2
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 1.3e-72 278.1 451 64.3
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 1.7e-72 277.7 456 63.4
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 6.6e-72 275.8 431 65.7
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 6.6e-72 275.8 431 65.7
AUR62043070 Chenopodium quinoa HOM05D005860 ORTHO05D006977 6.6e-72 275.8 433 67.4
Lju41A50T54 Lonicera japonica HOM05D005860 ORTHO05D006977 1.1e-71 275.0 441 62.8
AUR62032474 Chenopodium quinoa HOM05D005860 ORTHO05D006977 4.3e-71 273.1 433 66.5
HanXRQChr15g0486891 Helianthus annuus HOM05D005860 ORTHO05D006977 1.4e-66 258.1 464 61.6
ECA232G2764 Erigeron canadensis HOM05D005860 ORTHO05D006977 1.2e-65 255.0 460 59.1
Glyma.09G171700 Glycine max HOM05D005860 ORTHO05D006977 3.5e-65 253.4 199 66.8
Oeu050423.1 Olea europaea HOM05D005860 ORTHO05D006977 1.3e-64 251.5 210 61.0
CDE09G0687 Ceratophyllum demersum HOM05D005860 ORTHO05D006977 1.6e-62 244.6 417 57.1
Zm00001eb246440 Zea mays HOM05D005860 ORTHO05D006977 8.1e-62 242.3 442 56.8
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 1.1e-61 241.9 180 68.3
Rhsim08G0044500 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.8e-61 241.1 459 44.7
vmacro18326 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.7e-59 234.6 449 52.6
Rhsim08G0045000 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.4e-58 230.7 460 60.7
Rhsim08G0044700 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.3e-56 224.2 456 46.5
Rhsim08G0044400 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.1e-55 221.9 455 54.9
FAN14G0528 Fragaria x ananassa HOM05D005860 ORTHO05D006977 4.8e-54 216.5 286 87.4
Cfa015733 Carpinus fangiana HOM05D005860 ORTHO05D006977 7.9e-49 199.1 150 68.7
Haze_00763 Corylus avellana HOM05D005860 ORTHO05D006977 2.3e-40 171.0 352 48.3
HPP92_024250 Vanilla planifolia HOM05D005860 ORTHO05D006977 7.4e-39 166.0 332 60.8
Lsat_1_v5_gn_4_185440 Lactuca sativa HOM05D005860 ORTHO05D006977 1.1e-37 162.2 367 66.2
HPP92_024230 Vanilla planifolia HOM05D005860 ORTHO05D006977 2.5e-34 151.0 322 61.5
Migut.C00523 Erythranthe guttata HOM05D005860 ORTHO05D006977 2.1e-33 147.9 117 67.5
Mapoly0029s0044 Marchantia polymorpha HOM05D005860 ORTHO05D006977 1.9e-31 141.4 453 44.8
Rhsim08G0044900 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.7e-25 120.9 369 43.9
vmacro18330 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 5.1e-24 116.7 101 58.4
Pp3c9_18330 Physcomitrium patens HOM05D005860 ORTHO05D006977 8.7e-24 115.9 435 48.0
Os02g0602400 Oryza sativa ssp. japonica HOM05D005860 ORTHO05D006977 1.9e-23 114.8 269 49.8
Glyma.09G171766 Glycine max HOM05D005860 ORTHO05D006977 2.5e-23 114.4 145 74.5
ATR0686G162 Amborella trichopoda HOM05D005860 ORTHO05D006977 1.1e-21 109.0 358 31.6
Rhsim08G0044800 Rhododendron simsii HOM05D005860 ORTHO05D006977 4.1e-21 107.1 86 62.8
Pp3c15_12290 Physcomitrium patens HOM05D005860 ORTHO05D006977 2.9e-19 100.9 465 48.8
TAR374G0650 Trochodendron aralioides HOM05D005860 ORTHO05D006977 1.4e-18 98.6 173 38.7
Sed0001458 Sechium edule HOM05D005860 ORTHO05D006977 1.2e-17 95.5 89 58.4
HPP92_024251 Vanilla planifolia HOM05D005860 ORTHO05D006977 6.7e-16 89.7 92 48.9
vmacro18328 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 2.0e-15 88.2 88 55.7
ATR0609G011 Amborella trichopoda HOM05D005860 ORTHO05D006977 7.4e-15 86.3 145 51.0
AagrBONN_evm.TU.Sc2ySwM_117.926 Anthoceros agrestis HOM05D000273 ORTHO05D006977 8.2e-14 82.8 161 34.8
TAR374G0834 Trochodendron aralioides HOM05D005860 ORTHO05D006977 4.1e-13 80.5 55 72.7
TPR.G88 Trifolium pratense HOM05D005860 ORTHO05D006977 4.5e-12 77.0 58 62.1
Mapoly0007s0012 Marchantia polymorpha HOM05D005860 ORTHO05D006977 7.7e-12 76.3 151 33.8


User provided reference genes

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