Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3994 Fragaria x ananassa HOM05D028794 ORTHO05D045768 1.4e-125 453.0 239 100.0
FvH4_2g08060 Fragaria vesca HOM05D028794 ORTHO05D045768 2.8e-121 438.7 239 96.2
FvH4_2g08070 Fragaria vesca HOM05D001084 ORTHO05D029477 1.5e-18 97.4 285 30.9
FAN15G2711 Fragaria x ananassa HOM05D028794 ORTHO05D029477 3.8e-17 92.8 292 28.8
RcHm_v2.0_Chr6g0262571 Rosa chinensis HOM05D001084 ORTHO05D029477 1.9e-16 90.5 292 29.8
FvH4_2g06181 Fragaria vesca HOM05D001084 ORTHO05D022670 1.3e-14 84.3 250 28.8
FAN24G1401 Fragaria x ananassa HOM05D001084 ORTHO05D022670 1.3e-14 84.3 250 28.8
Prupe.8G103700 Prunus persica HOM05D001084 ORTHO05D020669 3.9e-14 82.8 243 30.0
RcHm_v2.0_Chr4g0420001 Rosa chinensis HOM05D001084 ORTHO05D020669 7.4e-13 78.6 242 33.5
RcHm_v2.0_Chr4g0419891 Rosa chinensis HOM05D001084 ORTHO05D020669 1.6e-12 77.4 243 33.7
RcHm_v2.0_Chr4g0395591 Rosa chinensis HOM05D001084 ORTHO05D020669 2.8e-12 76.6 238 32.8
VMungo1215G2091 Vigna mungo HOM05D001084 ORTHO05D001275 4.1e-11 72.8 229 27.5
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 5.3e-11 72.4 239 28.9
FAN05G5786 Fragaria x ananassa HOM05D028794 ORTHO05D001275 1.2e-10 71.2 62 54.8
RcHm_v2.0_Chr6g0265941 Rosa chinensis HOM05D001084 ORTHO05D022670 1.2e-10 71.2 247 24.7
FAN24G1391 Fragaria x ananassa HOM05D024028 ORTHO05D029452 1.0e-09 68.2 247 27.1
CiPaw.02G015000 Carya illinoinensis HOM05D001084 ORTHO05D001275 1.3e-09 67.8 231 25.1
Haze_15137 Corylus avellana HOM05D001084 ORTHO05D001275 1.3e-09 67.8 234 26.9
Prupe.7G148500 Prunus persica HOM05D001084 ORTHO05D001275 1.3e-09 67.8 238 25.6
Cfa004264 Carpinus fangiana HOM05D001084 ORTHO05D001275 2.2e-09 67.0 238 26.1
Glyma.02G059100 Glycine max HOM05D001084 ORTHO05D001275 2.2e-09 67.0 233 27.0
MD02G1154800 Malus domestica HOM05D001084 ORTHO05D001275 2.9e-09 66.6 234 26.1
Nitab4.5_0004280g0090 Nicotiana tabacum HOM05D001084 ORTHO05D001275 6.5e-09 65.5 231 26.0
Nitab4.5_0012349g0020 Nicotiana tabacum HOM05D001084 ORTHO05D001275 6.5e-09 65.5 231 26.0
FAN28G2585 Fragaria x ananassa HOM05D001084 ORTHO05D001275 1.4e-08 64.3 233 25.3
Glyma.16G141800 Glycine max HOM05D001084 ORTHO05D001275 2.5e-08 63.5 231 24.7
MD15G1269200 Malus domestica HOM05D001084 ORTHO05D001275 2.5e-08 63.5 239 24.7
FAN26G2905 Fragaria x ananassa HOM05D001084 ORTHO05D001275 4.2e-08 62.8 233 24.9
CiPaw.01G032400 Carya illinoinensis HOM05D001084 ORTHO05D001275 5.5e-08 62.4 231 26.4
Cpa.g.sc158.19 Carica papaya HOM05D001084 ORTHO05D001275 7.2e-08 62.0 236 26.3
Peaxi162Scf00016g00102 Petunia axillaris HOM05D001084 ORTHO05D001275 7.2e-08 62.0 231 25.5
TWI73G0528 Tripterygium wilfordii HOM05D001084 ORTHO05D001275 7.2e-08 62.0 232 24.6
FvH4_1g14080 Fragaria vesca HOM05D001084 ORTHO05D001275 9.4e-08 61.6 233 24.9
FAN19G0364 Fragaria x ananassa HOM05D001084 ORTHO05D001275 9.4e-08 61.6 233 24.9
FAN23G1338 Fragaria x ananassa HOM05D001084 ORTHO05D001275 2.1e-07 60.5 233 24.0
PGSC0003DMG400025185 Solanum tuberosum HOM05D001084 ORTHO05D001275 2.1e-07 60.5 231 25.1
Eucgr.I02475 Eucalyptus grandis HOM05D001084 ORTHO05D001275 2.7e-07 60.1 233 23.2
CAN.G322.110 Capsicum annuum HOM05D001084 ORTHO05D001275 3.6e-07 59.7 231 25.1
FAN03G1277 Fragaria x ananassa HOM05D001084 ORTHO05D022670 3.6e-07 59.7 255 25.1
Gohir.A12G066100 Gossypium hirsutum HOM05D001084 ORTHO05D001275 4.6e-07 59.3 234 25.2
AT2G18630 Arabidopsis thaliana HOM05D001084 ORTHO05D001275 1.8e-06 57.4 234 25.6
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 1.8e-06 57.4 230 23.9
Solyc01g109380.3 Solanum lycopersicum HOM05D001084 ORTHO05D001275 1.8e-06 57.4 231 24.7
AL3G51980 Arabidopsis lyrata HOM05D001084 ORTHO05D001275 2.3e-06 57.0 237 25.3
Sabra04G0100300 Salix brachista HOM05D001084 ORTHO05D001275 2.3e-06 57.0 230 26.5
Phvul.003G010400 Phaseolus vulgaris HOM05D001084 ORTHO05D001275 3.0e-06 56.6 231 25.5
RcHm_v2.0_Chr6g0263111 Rosa chinensis HOM05D024028 ORTHO05D029452 3.0e-06 56.6 242 25.2
Sopen01g051570 Solanum pennellii HOM05D001084 ORTHO05D001275 3.0e-06 56.6 231 24.7
Actinidia00499 Actinidia chinensis HOM05D001084 ORTHO05D001275 5.1e-06 55.8 226 22.6
Gohir.D12G066500 Gossypium hirsutum HOM05D001084 ORTHO05D001275 5.1e-06 55.8 234 24.8
Potri.004G150800 Populus trichocarpa HOM05D001084 ORTHO05D001275 5.1e-06 55.8 186 27.4
CARHR109220 Cardamine hirsuta HOM05D001084 ORTHO05D001275 6.7e-06 55.5 235 24.3
BcaC06g36440 Brassica carinata HOM05D001084 ORTHO05D001275 8.8e-06 55.1 234 23.9


User provided reference genes

Program Settings