Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3967 Fragaria x ananassa HOM05D007569 ORTHO05D009268 2.9e-51 204.9 103 100.0
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 9.2e-45 183.3 103 92.2
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 9.2e-45 183.3 103 92.2
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 3.0e-35 151.8 104 77.9
FAN02G0921 Fragaria x ananassa HOM05D000214 ORTHO05D009268 6.6e-35 150.6 86 87.2
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 6.9e-16 87.4 100 53.0
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 5.4e-13 77.8 103 49.5
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 9.3e-13 77.0 102 49.0
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 2.1e-12 75.9 99 51.5
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 4.6e-12 74.7 92 50.0
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 4.6e-12 74.7 101 47.5
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 1.3e-11 73.2 97 46.4
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 3.0e-11 72.0 96 46.9
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 3.9e-11 71.6 103 44.7
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 3.9e-11 71.6 99 47.5
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 1.5e-10 69.7 98 49.0
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 4.3e-10 68.2 66 57.6
MD12G1122100 Malus domestica HOM05D007569 ORTHO05D009268 4.3e-10 68.2 66 57.6
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 2.1e-09 65.9 103 46.6
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 8.1e-09 63.9 91 44.0
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 8.1e-09 63.9 99 45.5
Lalb_Chr01g0018971 Lupinus albus HOM05D007569 ORTHO05D009268 1.1e-08 63.5 61 52.5
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 2.4e-08 62.4 52 61.5
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 2.4e-08 62.4 52 61.5
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 5.3e-08 61.2 94 45.7
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 6.9e-08 60.8 63 47.6
AL6G12400 Arabidopsis lyrata HOM05D007569 ORTHO05D009268 9.0e-08 60.5 76 44.7
Thhalv10015759m.g Eutrema salsugineum HOM05D007569 ORTHO05D009268 9.0e-08 60.5 74 47.3
arahy.Tifrunner.gnm1.ann1.4H2E4D Arachis hypogaea HOM05D007569 ORTHO05D009268 1.2e-07 60.1 51 60.8
arahy.Tifrunner.gnm1.ann1.PY3JPZ Arachis hypogaea HOM05D007569 ORTHO05D009268 1.2e-07 60.1 51 60.8
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 1.2e-07 60.1 46 60.9
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 2.0e-07 59.3 75 46.7
BcaB05g21850 Brassica carinata HOM05D007569 ORTHO05D009268 2.6e-07 58.9 58 51.7
Gohir.D01G205200 Gossypium hirsutum HOM05D007569 ORTHO05D009268 2.6e-07 58.9 52 59.6
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 2.6e-07 58.9 100 43.0
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 3.4e-07 58.5 96 41.7
Sp6g39590 Schrenkiella parvula HOM05D007569 ORTHO05D009268 4.5e-07 58.2 75 48.0
CARHR210230 Cardamine hirsuta HOM05D007569 ORTHO05D009268 5.8e-07 57.8 60 50.0
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 5.8e-07 57.8 60 53.3
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 1.3e-06 56.6 96 38.5
BcaC03g13030 Brassica carinata HOM05D007569 ORTHO05D009268 1.7e-06 56.2 58 50.0
C02p00800 Brassica napus HOM05D004310 ORTHO05D009268 1.7e-06 56.2 58 50.0
Sabra06G0102400 Salix brachista HOM05D007569 ORTHO05D009268 2.9e-06 55.5 100 40.0
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 2.9e-06 55.5 82 42.7
EL10Ac7g16512 Beta vulgaris HOM05D007569 ORTHO05D009268 6.4e-06 54.3 57 45.6
BraA02t04745Z Brassica rapa HOM05D007569 ORTHO05D009268 6.4e-06 54.3 86 39.5
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 6.4e-06 54.3 97 42.3
Lj5g0021553 Lotus japonicus HOM05D007569 ORTHO05D009268 6.4e-06 54.3 86 44.2
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 8.4e-06 53.9 103 43.7
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 8.4e-06 53.9 103 43.7
TWI74G0066 Tripterygium wilfordii HOM05D007569 ORTHO05D009268 8.4e-06 53.9 65 52.3


User provided reference genes

Program Settings