Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3960 Fragaria x ananassa HOM05D036894 ORTHO05D045765 2.9e-90 335.1 158 100.0
FvH4_6g04020 Fragaria vesca HOM05D036894 ORTHO05D045765 4.2e-81 304.7 161 90.7
FAN09G3864 Fragaria x ananassa HOM05D036894 ORTHO05D002507 1.7e-42 176.4 122 72.1
Cfa006492 Carpinus fangiana HOM05D000001 ORTHO05D000003 2.2e-21 106.3 139 41.0
FAN09G1688 Fragaria x ananassa HOM05D000040 ORTHO05D002507 8.3e-21 104.4 134 44.8
FvH4_6g04030 Fragaria vesca HOM05D000040 ORTHO05D002507 1.1e-20 104.0 134 44.8
FAN09G0755 Fragaria x ananassa HOM05D000040 ORTHO05D002507 1.6e-19 100.1 133 43.6
FAN05G5639 Fragaria x ananassa HOM05D000040 ORTHO05D002507 7.8e-19 97.8 134 42.5
FAN05G1285 Fragaria x ananassa HOM05D000040 ORTHO05D002507 2.8e-16 89.4 103 46.6
FvH4_6g04040 Fragaria vesca HOM05D000040 ORTHO05D002507 1.4e-15 87.0 103 44.7
Ciclev10004014m.g Citrus clementina HOM05D000040 ORTHO05D002507 1.1e-12 77.4 143 32.2
EL10Ac1g01918 Beta vulgaris HOM05D000040 ORTHO05D002507 2.7e-11 72.8 147 31.3
AUR62018287 Chenopodium quinoa HOM05D000040 ORTHO05D002507 6.0e-11 71.6 138 33.3
SGA_v2.0_scaffold11G05753 Striga asiatica HOM05D000040 ORTHO05D002507 1.3e-10 70.5 138 33.3
SGA_v2.0_scaffold1G00419 Striga asiatica HOM05D000040 ORTHO05D002507 3.0e-10 69.3 139 32.4
Medtr2g070430 Medicago truncatula HOM05D000040 ORTHO05D002507 6.6e-10 68.2 125 34.4
SGA_v2.0_scaffold1G00420 Striga asiatica HOM05D000040 ORTHO05D002507 1.5e-09 67.0 135 31.9
MD02G1129300 Malus domestica HOM05D000040 ORTHO05D022579 4.7e-08 62.0 129 37.2
TAR369G1147 Trochodendron aralioides HOM05D000040 ORTHO05D002507 4.7e-08 62.0 98 37.8
Actinidia00692 Actinidia chinensis HOM05D000143 ORTHO05D002507 1.1e-07 60.8 149 32.2
Medtr7g114320 Medicago truncatula HOM05D000040 ORTHO05D002507 1.4e-07 60.5 111 31.5
Haze_04297 Corylus avellana HOM05D000040 ORTHO05D002507 2.3e-07 59.7 67 43.3
SEGI_04844 Sequoiadendron giganteum HOM05D000040 ORTHO05D000267 2.3e-07 59.7 120 30.0
BcaB06g25520 Brassica carinata HOM05D000040 ORTHO05D005442 3.1e-07 59.3 137 29.2
ECA248G1202 Erigeron canadensis HOM05D000040 ORTHO05D002000 3.1e-07 59.3 99 36.4
A05p36780 Brassica napus HOM05D000040 ORTHO05D005442 4.0e-07 58.9 136 28.7
BraA05t22481Z Brassica rapa HOM05D000040 ORTHO05D005442 4.0e-07 58.9 136 28.7
BolC5t34189H Brassica oleracea HOM05D000040 ORTHO05D005442 6.8e-07 58.2 138 28.3
BcaC05g29245 Brassica carinata HOM05D000040 ORTHO05D005442 1.2e-06 57.4 138 28.3
C05p55210 Brassica napus HOM05D000040 ORTHO05D005442 1.2e-06 57.4 138 28.3
BcaC05g29246 Brassica carinata HOM05D000040 ORTHO05D005442 2.0e-06 56.6 136 28.7
C05p55220 Brassica napus HOM05D000040 ORTHO05D005442 2.0e-06 56.6 136 28.7
A05p36770 Brassica napus HOM05D000040 ORTHO05D005442 2.6e-06 56.2 138 27.5
BolC5t34190H Brassica oleracea HOM05D000040 ORTHO05D005442 2.6e-06 56.2 136 28.7
BraA05t22480Z Brassica rapa HOM05D000040 ORTHO05D005442 2.6e-06 56.2 138 27.5
PGR083G1697 Punica granatum HOM05D000040 ORTHO05D002507 3.4e-06 55.8 124 30.6
CsaV3_1G031830 Cucumis sativus L. HOM05D000040 ORTHO05D004411 4.4e-06 55.5 96 34.4
FAN04G0291 Fragaria x ananassa HOM05D000040 ORTHO05D012518 4.4e-06 55.5 143 30.8
Os08g0469000 Oryza sativa ssp. japonica HOM05D000040 ORTHO05D000267 4.4e-06 55.5 109 33.0
BcaB06g25522 Brassica carinata HOM05D000040 ORTHO05D005442 5.8e-06 55.1 137 29.2
Lalb_Chr20g0108341 Lupinus albus HOM05D000040 ORTHO05D005442 5.8e-06 55.1 134 27.6
MD05G1240800 Malus domestica HOM05D000040 ORTHO05D005442 5.8e-06 55.1 141 27.7
CAN.G98.29 Capsicum annuum HOM05D000040 ORTHO05D001305 7.6e-06 54.7 122 35.2
MELO3C017436.2 Cucumis melo HOM05D000040 ORTHO05D004411 7.6e-06 54.7 96 34.4
Haze_04829 Corylus avellana HOM05D000040 ORTHO05D002507 9.9e-06 54.3 104 37.5


User provided reference genes

Program Settings