Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.6e-113 411.4 279 100.0
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 1.5e-105 386.7 280 94.6
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.8e-104 382.5 280 90.0
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.5e-94 350.1 280 90.4
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 2.3e-90 336.3 279 84.2
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.0e-82 309.3 261 88.9
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 7.7e-70 268.1 214 92.1
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 7.7e-62 241.5 278 57.9
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 6.7e-58 228.4 204 68.6
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 1.2e-41 174.5 278 41.0
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 2.6e-41 173.3 206 54.9
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.8e-39 167.2 208 58.2
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 1.6e-38 164.1 185 58.4
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 5.9e-38 162.2 185 56.2
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 7.8e-38 161.8 177 53.7
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 1.1e-36 157.9 177 55.4
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 4.3e-36 156.0 184 46.7
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 5.6e-36 155.6 184 46.2
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 1.0e-34 151.4 192 52.6
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 1.0e-34 151.4 186 53.2
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 1.4e-34 151.0 184 46.2
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 1.4e-34 151.0 201 52.7
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 1.8e-34 150.6 201 51.2
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 6.8e-34 148.7 188 51.1
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 2.6e-33 146.7 183 55.2
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 2.9e-32 143.3 186 57.5
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 8.3e-32 141.7 207 51.7
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 5.4e-31 139.0 186 58.1
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 7.0e-31 138.7 185 52.4
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 9.2e-31 138.3 183 59.0
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 9.2e-31 138.3 183 59.0
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 1.2e-30 137.9 186 51.6
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 2.0e-30 137.1 203 48.3
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 8.6e-29 131.7 204 47.1
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 4.4e-25 119.4 204 44.6
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 5.8e-25 119.0 279 34.8
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 1.6e-22 110.9 199 50.3
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 1.9e-20 104.0 136 44.9
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 6.8e-18 95.5 97 48.5
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 6.8e-18 95.5 108 60.2
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 1.2e-17 94.7 207 41.1
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 2.4e-15 87.0 159 37.1
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 6.6e-13 79.0 153 38.6
MBI14_g41802_MAGBIO Magnolia biondii HOM05D008730 ORTHO05D010922 1.2e-06 58.2 70 42.9


User provided reference genes

Program Settings