Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 9.0e-42 174.1 167 100.0
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 7.9e-38 161.0 167 93.4
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 7.4e-36 154.5 167 91.6
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.0e-28 129.8 169 88.8
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 1.2e-22 110.5 170 83.5
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 5.3e-18 95.1 71 71.8
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 1.3e-16 90.5 78 70.5
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 5.0e-16 88.6 72 69.4
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 1.1e-15 87.4 79 64.6
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 1.1e-15 87.4 73 63.0
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.9e-15 86.7 97 56.7
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 3.2e-15 85.9 66 66.7
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 5.5e-15 85.1 72 66.7
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 9.4e-15 84.3 57 75.4
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 1.6e-14 83.6 81 63.0
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 1.6e-14 83.6 75 60.0
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 2.7e-14 82.8 54 79.6
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 2.7e-14 82.8 73 63.0
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 2.7e-14 82.8 64 73.4
FAN02G1687 Fragaria x ananassa HOM05D007783 ORTHO05D009740 4.7e-14 82.0 167 77.2
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 4.7e-14 82.0 64 70.3
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 6.1e-14 81.6 74 68.9
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 8.0e-14 81.3 71 67.6
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 8.0e-14 81.3 77 64.9
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 8.0e-14 81.3 63 71.4
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 8.0e-14 81.3 60 71.7
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 1.0e-13 80.9 60 71.7
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.0e-13 80.9 78 65.4
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 1.4e-13 80.5 72 65.3
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 1.4e-13 80.5 65 67.7
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 2.3e-13 79.7 71 63.4
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 2.3e-13 79.7 70 62.9
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 3.0e-13 79.3 73 63.0
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 6.7e-13 78.2 75 58.7
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 6.7e-13 78.2 76 63.2
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 6.7e-13 78.2 78 59.0
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 8.8e-13 77.8 58 72.4
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 8.8e-13 77.8 79 55.7
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 1.2e-12 77.4 78 56.4
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 1.5e-12 77.0 58 70.7
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 1.5e-12 77.0 74 64.9
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 1.5e-12 77.0 76 61.8
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 5.7e-12 75.1 61 67.2
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 7.5e-12 74.7 61 67.2
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 9.7e-12 74.3 67 62.7
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.7e-11 73.6 76 61.8
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.7e-11 73.6 76 61.8
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 2.2e-11 73.2 72 61.1
ECA246G5319 Erigeron canadensis HOM05D007783 ORTHO05D009740 2.8e-11 72.8 76 55.3
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.8e-11 72.8 69 63.8
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 2.8e-11 72.8 69 63.8
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 3.7e-11 72.4 67 58.2
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 4.8e-11 72.0 77 55.8
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 4.8e-11 72.0 83 57.8
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 4.8e-11 72.0 65 66.2
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 1.1e-10 70.9 76 55.3
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 1.8e-10 70.1 78 53.8
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 2.4e-10 69.7 85 55.3
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 4.1e-10 68.9 75 57.3
Sp3g19900 Schrenkiella parvula HOM05D007783 ORTHO05D009740 5.3e-10 68.6 49 73.5
THA.LOC104802538 Tarenaya hassleriana HOM05D007783 ORTHO05D009740 9.1e-10 67.8 65 60.0
Sabra07G0097600 Salix brachista HOM05D007783 ORTHO05D009740 1.6e-09 67.0 72 56.9
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 2.7e-09 66.2 73 56.2
Psat5g265520 Pisum sativum HOM05D007783 ORTHO05D009740 3.5e-09 65.9 59 55.9
C05p41370 Brassica napus HOM05D007783 ORTHO05D009740 5.9e-09 65.1 81 54.3
CARHR097930 Cardamine hirsuta HOM05D007783 ORTHO05D009740 1.0e-08 64.3 72 58.3
AL3G36260 Arabidopsis lyrata HOM05D007783 ORTHO05D009740 1.3e-08 63.9 69 55.1
AT3G22070 Arabidopsis thaliana HOM05D007783 ORTHO05D009740 1.3e-08 63.9 49 67.3
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 1.3e-08 63.9 75 58.7
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 1.7e-08 63.5 70 60.0
A01p33040 Brassica napus HOM05D007783 ORTHO05D009740 2.2e-08 63.2 53 66.0
C01p42180 Brassica napus HOM05D007783 ORTHO05D009740 2.2e-08 63.2 53 66.0
BolC1t04180H Brassica oleracea HOM05D007783 ORTHO05D009740 2.2e-08 63.2 53 66.0
BraA01t03426Z Brassica rapa HOM05D007783 ORTHO05D009740 2.2e-08 63.2 53 66.0
Carub.0003s2223 Capsella rubella HOM05D007783 ORTHO05D009740 3.8e-08 62.4 93 49.5
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 3.8e-08 62.4 69 52.2
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 5.0e-08 62.0 71 52.1
SGA_v2.0_scaffold49G18329 Striga asiatica HOM05D007783 ORTHO05D009740 6.5e-08 61.6 71 53.5
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 8.5e-08 61.2 71 57.7
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 1.1e-07 60.8 76 50.0
CDE05G0218 Ceratophyllum demersum HOM05D007783 ORTHO05D009740 1.5e-07 60.5 76 52.6
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 1.6e-06 57.0 63 60.3
Lalb_Chr19g0135631 Lupinus albus HOM05D007783 ORTHO05D009740 4.7e-06 55.5 65 46.2


User provided reference genes

Program Settings