Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3694 Fragaria x ananassa HOM05D007040 ORTHO05D017016 0.0e+00 1462.6 716 100.0
FAN05G0243 Fragaria x ananassa HOM05D007040 ORTHO05D017016 0.0e+00 1412.1 750 93.7
FAN07G2054 Fragaria x ananassa HOM05D007040 ORTHO05D017016 0.0e+00 1138.3 769 78.2
FvH4_4g02210 Fragaria vesca HOM05D007040 ORTHO05D017016 9.9e-247 857.1 716 66.8
FAN17G1088 Fragaria x ananassa HOM05D007040 ORTHO05D017016 5.4e-192 675.2 751 54.1
FAN16G1318 Fragaria x ananassa HOM05D007040 ORTHO05D017016 2.7e-127 460.3 353 70.3
FvH4_1g25700 Fragaria vesca HOM05D007040 ORTHO05D017016 2.0e-114 417.5 318 70.1
FAN28G1109 Fragaria x ananassa HOM05D007040 ORTHO05D017016 1.0e-81 308.9 183 86.9
RcHm_v2.0_Chr5g0047301 Rosa chinensis HOM05D007040 ORTHO05D017016 1.4e-78 298.5 355 48.2
FvH4_4g14564 Fragaria vesca HOM05D007040 ORTHO05D017016 1.7e-68 265.0 414 41.3
FAN14G1747 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-61 242.3 715 29.8
FAN15G1458 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.2e-61 242.3 504 32.9
FAN27G3262 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.4e-61 240.4 680 30.9
FAN21G2590 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.2e-59 232.6 681 30.7
FAN16G0371 Fragaria x ananassa HOM05D007040 ORTHO05D025561 1.0e-57 229.2 229 60.7
FAN23G1065 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-57 228.8 664 30.1
FAN05G2524 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.9e-51 208.4 679 28.0
FvH4_2g11190 Fragaria vesca HOM05D007040 ORTHO05D001602 2.4e-51 208.0 379 35.6
FAN20G2118 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.4e-51 208.0 240 45.0
FAN02G0486 Fragaria x ananassa HOM05D007040 ORTHO05D001602 7.0e-51 206.5 394 36.0
FAN03G1439 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.2e-51 206.1 618 29.9
FvH4_6g24041 Fragaria vesca HOM05D007040 ORTHO05D001602 4.6e-50 203.8 350 35.7
FAN02G4542 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.0e-49 201.1 466 32.4
FAN09G3473 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.4e-46 192.2 661 28.9
FAN08G1044 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.8e-46 191.8 424 32.8
FvH4_2g16130 Fragaria vesca HOM05D007040 ORTHO05D001602 2.3e-46 191.4 223 47.5
FAN23G0411 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.0e-46 190.7 641 28.4
FAN23G1647 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.9e-44 183.7 681 27.8
FAN05G5575 Fragaria x ananassa HOM05D007040 ORTHO05D001602 3.9e-41 174.1 619 29.7
FAN26G1067 Fragaria x ananassa HOM05D002010 ORTHO05D001602 1.1e-38 166.0 245 38.4
FAN28G0487 Fragaria x ananassa HOM05D007040 ORTHO05D001602 5.4e-35 153.7 331 33.2
FAN26G0720 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-33 149.1 190 44.7
FvH4_2g14880 Fragaria vesca HOM05D007040 ORTHO05D012106 1.3e-28 132.5 647 24.0
FAN23G1311 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-28 132.5 145 47.6
FAN15G1914 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.9e-28 131.3 131 51.1
FvH4_1g02840 Fragaria vesca HOM05D007040 ORTHO05D025561 1.1e-27 129.4 249 39.8
QL02p010396 Quercus lobata HOM05D002010 ORTHO05D000502 1.7e-25 122.1 223 36.8
FAN24G2329 Fragaria x ananassa HOM05D007040 ORTHO05D001602 7.3e-24 116.7 216 36.6
FAN02G3936 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-23 115.9 177 37.3
FAN17G2479 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.3e-23 115.9 604 25.0
Dinv09626 Davidia involucrata HOM05D002010 ORTHO05D001602 1.8e-22 112.1 323 25.1
FAN20G0008 Fragaria x ananassa HOM05D007040 ORTHO05D001602 6.9e-22 110.2 365 28.8
Dinv08992 Davidia involucrata HOM05D002010 ORTHO05D001602 4.5e-21 107.5 247 27.1
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 9.9e-21 106.3 247 27.9
FAN24G3215 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.7e-20 105.5 106 50.9
Dinv13093 Davidia involucrata HOM05D002010 ORTHO05D001602 2.2e-20 105.1 256 27.3
Dinv05229 Davidia involucrata HOM05D002010 ORTHO05D001602 2.9e-20 104.8 256 27.0
Dinv24716 Davidia involucrata HOM05D002010 ORTHO05D001602 2.9e-20 104.8 256 27.3
Dinv00203 Davidia involucrata HOM05D002010 ORTHO05D001602 6.4e-20 103.6 247 26.7
TAR325G0002 Trochodendron aralioides HOM05D002010 ORTHO05D001602 1.4e-19 102.4 316 25.3
Dinv04682 Davidia involucrata HOM05D002010 ORTHO05D001602 2.4e-19 101.7 256 26.6
Dinv10756 Davidia involucrata HOM05D002010 ORTHO05D001602 2.4e-19 101.7 256 26.6
Dinv03884 Davidia involucrata HOM05D002010 ORTHO05D001602 3.2e-19 101.3 256 26.2
Dinv39029 Davidia involucrata HOM05D002010 ORTHO05D001602 4.2e-19 100.9 256 26.2
Dinv09159 Davidia involucrata HOM05D002010 ORTHO05D001602 5.4e-19 100.5 279 26.2
Dinv14701 Davidia involucrata HOM05D002010 ORTHO05D001602 7.1e-19 100.1 256 27.3
Dinv21511 Davidia involucrata HOM05D002010 ORTHO05D001602 9.3e-19 99.8 256 26.2
TAR325G0001 Trochodendron aralioides HOM05D002010 ORTHO05D001602 9.3e-19 99.8 238 29.4
Dinv19302 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-18 99.0 247 27.1
Dinv25862 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-18 99.0 256 26.2
Dinv34720 Davidia involucrata HOM05D002010 ORTHO05D001602 6.0e-18 97.1 250 28.4
FAN05G2679 Fragaria x ananassa HOM05D007040 ORTHO05D012106 6.0e-18 97.1 187 35.3
Dinv26201 Davidia involucrata HOM05D002010 ORTHO05D001602 7.9e-18 96.7 243 26.3
Dinv36416 Davidia involucrata HOM05D002010 ORTHO05D001602 7.9e-18 96.7 256 26.2
Dinv12540 Davidia involucrata HOM05D002010 ORTHO05D001602 1.0e-17 96.3 245 29.0
FAN05G4005 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.0e-17 96.3 231 32.5
TAR362G1336 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.3e-17 95.1 214 30.4
Dinv22441 Davidia involucrata HOM05D002010 ORTHO05D001602 6.7e-17 93.6 247 27.5
Dinv33750 Davidia involucrata HOM05D002010 ORTHO05D001602 8.7e-17 93.2 245 28.2
COL.COLO4_38169 Corchorus olitorius HOM05D015334 ORTHO05D016256 1.1e-16 92.8 205 29.3
PSO384G4043 Papaver somniferum HOM05D002010 ORTHO05D001602 1.5e-16 92.4 244 30.3
Dinv13642 Davidia involucrata HOM05D002010 ORTHO05D001602 1.9e-16 92.0 758 22.4
Dinv18724 Davidia involucrata HOM05D002010 ORTHO05D001602 2.5e-16 91.7 209 30.1
Dinv36990 Davidia involucrata HOM05D002010 ORTHO05D001602 2.5e-16 91.7 209 30.1
Dinv27102 Davidia involucrata HOM05D002010 ORTHO05D001602 3.3e-16 91.3 204 28.9
Dinv34094 Davidia involucrata HOM05D002010 ORTHO05D001602 4.3e-16 90.9 258 27.1
CSS0041665 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 7.4e-16 90.1 251 29.1
CSS0015520 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 9.6e-16 89.7 251 29.1
CSS0018784 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 9.6e-16 89.7 251 29.1
CSS0023629 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 9.6e-16 89.7 251 29.1
CSS0045752 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 9.6e-16 89.7 251 29.1
FAN03G3284 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.6e-16 89.7 83 50.6
FAN27G2232 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.6e-16 89.7 173 35.8
TAR629G2840 Trochodendron aralioides HOM05D002010 ORTHO05D001602 9.6e-16 89.7 161 33.5
PSO017G4629 Papaver somniferum HOM05D002010 ORTHO05D001602 1.6e-15 89.0 222 26.1
Dinv07710 Davidia involucrata HOM05D002010 ORTHO05D001602 2.1e-15 88.6 238 25.2
COL.COLO4_35428 Corchorus olitorius HOM05D002010 ORTHO05D001602 3.7e-15 87.8 223 29.6
Dinv13009 Davidia involucrata HOM05D002010 ORTHO05D001602 3.7e-15 87.8 186 32.3
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.8e-15 87.4 251 28.7
CSS0012227 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.2e-15 87.0 251 28.7
CSS0030247 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.2e-15 87.0 251 28.7
CSS0012880 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.1e-14 86.3 251 28.3
Dinv25992 Davidia involucrata HOM05D001680 ORTHO05D001596 4.0e-14 84.3 230 28.7
FAN04G2361 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.0e-14 84.3 364 25.8
Dinv02873 Davidia involucrata HOM05D002010 ORTHO05D001602 5.3e-14 84.0 244 24.2
Dinv21136 Davidia involucrata HOM05D002010 ORTHO05D001602 5.3e-14 84.0 174 27.6
Dinv13534 Davidia involucrata HOM05D002010 ORTHO05D001602 6.9e-14 83.6 236 24.6
PSO782G1237 Papaver somniferum HOM05D002010 ORTHO05D001602 1.5e-13 82.4 233 26.2
vmacro13075 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 1.5e-13 82.4 239 30.1
COL.COLO4_08517 Corchorus olitorius HOM05D000890 ORTHO05D000697 3.4e-13 81.3 169 30.2
Dinv01931 Davidia involucrata HOM05D002010 ORTHO05D001602 3.4e-13 81.3 173 27.7
Dinv12198 Davidia involucrata HOM05D002010 ORTHO05D001602 3.4e-13 81.3 209 25.8
FAN15G2806 Fragaria x ananassa HOM05D007040 ORTHO05D012106 3.4e-13 81.3 104 41.3
Dinv05679 Davidia involucrata HOM05D002010 ORTHO05D001602 4.5e-13 80.9 139 31.7
FAN16G2256 Fragaria x ananassa HOM05D007040 ORTHO05D001602 4.5e-13 80.9 199 26.6
FAN13G0440 Fragaria x ananassa HOM05D007040 ORTHO05D001602 9.9e-13 79.7 163 30.7
TAR625G0747 Trochodendron aralioides HOM05D002010 ORTHO05D001602 9.9e-13 79.7 197 24.9
FAN10G1400 Fragaria x ananassa HOM05D007040 ORTHO05D205826 1.7e-12 79.0 72 65.3
Dinv19806 Davidia involucrata HOM05D002010 ORTHO05D001602 2.2e-12 78.6 187 31.0
Dinv23080 Davidia involucrata HOM05D002010 ORTHO05D001602 2.2e-12 78.6 187 31.0
Dinv37000 Davidia involucrata HOM05D002010 ORTHO05D001602 2.2e-12 78.6 187 31.0
Dinv18170 Davidia involucrata HOM05D002010 ORTHO05D001602 2.9e-12 78.2 104 38.5
Dinv11378 Davidia involucrata HOM05D002010 ORTHO05D001602 3.8e-12 77.8 244 22.5
Dinv37125 Davidia involucrata HOM05D002010 ORTHO05D001602 3.8e-12 77.8 199 26.1
Dinv05135 Davidia involucrata HOM05D002010 ORTHO05D001602 6.4e-12 77.0 217 24.0
FAN10G2286 Fragaria x ananassa HOM05D007040 ORTHO05D204381 1.1e-11 76.3 69 66.7
Dinv05343 Davidia involucrata HOM05D002010 ORTHO05D001602 1.9e-11 75.5 109 35.8
vmacro11007 Vaccinium macrocarpon HOM05D002010 ORTHO05D001602 4.2e-11 74.3 258 27.5
Dinv06448 Davidia involucrata HOM05D002010 ORTHO05D001602 5.5e-11 73.9 121 31.4
Dinv11446 Davidia involucrata HOM05D002010 ORTHO05D001602 5.5e-11 73.9 130 33.8
Dinv01698 Davidia involucrata HOM05D002010 ORTHO05D001602 7.1e-11 73.6 129 31.8
Dinv24135 Davidia involucrata HOM05D002010 ORTHO05D001602 1.2e-10 72.8 182 28.0
Dinv00969 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-10 72.4 256 25.8
Dinv10265 Davidia involucrata HOM05D002010 ORTHO05D001602 1.6e-10 72.4 120 32.5
Dinv18128 Davidia involucrata HOM05D002010 ORTHO05D001602 2.1e-10 72.0 250 24.0
TAR371G0532 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.7e-10 71.6 160 29.4
PSO832G3401 Papaver somniferum HOM05D002010 ORTHO05D001602 4.6e-10 70.9 120 32.5
TAR622G0226 Trochodendron aralioides HOM05D002010 ORTHO05D001602 6.0e-10 70.5 108 35.2
TAR633G1996 Trochodendron aralioides HOM05D002010 ORTHO05D001602 7.9e-10 70.1 223 25.1
Dinv18909 Davidia involucrata HOM05D002010 ORTHO05D001602 1.0e-09 69.7 234 24.8
Dinv02877 Davidia involucrata HOM05D002010 ORTHO05D001602 1.3e-09 69.3 111 29.7
Dinv19284 Davidia involucrata HOM05D002010 ORTHO05D001602 1.8e-09 68.9 138 28.3
COL.COLO4_24693 Corchorus olitorius HOM05D016055 ORTHO05D016256 2.3e-09 68.6 122 35.2
Dinv15370 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-09 68.6 106 34.9
Dinv38959 Davidia involucrata HOM05D002010 ORTHO05D001602 2.3e-09 68.6 203 27.1
FAN23G0445 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.3e-09 68.6 170 29.4
COL.COLO4_07073 Corchorus olitorius HOM05D016055 ORTHO05D016256 5.1e-09 67.4 122 36.1
COL.COLO4_31370 Corchorus olitorius HOM05D016055 ORTHO05D016256 5.1e-09 67.4 124 33.9
QL02p034770 Quercus lobata HOM05D002010 ORTHO05D016256 5.1e-09 67.4 105 36.2
TAR374G0327 Trochodendron aralioides HOM05D002546 ORTHO05D002671 1.5e-08 65.9 197 25.9
Rhsim13G0108400 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.9e-08 65.5 226 24.8
FAN02G2163 Fragaria x ananassa HOM05D007040 ORTHO05D001602 2.5e-08 65.1 50 58.0
COL.COLO4_24703 Corchorus olitorius HOM05D016055 ORTHO05D016256 9.6e-08 63.2 119 31.9
Thecc.05G161900 Theobroma cacao HOM05D002010 ORTHO05D001602 2.1e-07 62.0 106 34.9
Dinv28157 Davidia involucrata HOM05D002010 ORTHO05D001602 2.8e-07 61.6 117 30.8
TAR636G0802 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.8e-07 61.6 145 30.3
FAN17G2358 Fragaria x ananassa HOM05D007040 ORTHO05D001602 8.2e-07 60.1 39 64.1
Lj6g0016509 Lotus japonicus HOM05D001371 ORTHO05D001319 8.2e-07 60.1 219 25.6
FAN15G2267 Fragaria x ananassa HOM05D007040 ORTHO05D001602 1.1e-06 59.7 57 47.4
Dinv20759 Davidia involucrata HOM05D002010 ORTHO05D001602 1.4e-06 59.3 104 31.7
PGSC0003DMG400022226 Solanum tuberosum HOM05D001371 ORTHO05D001319 1.4e-06 59.3 181 28.7
Dinv44681 Davidia involucrata HOM05D002010 ORTHO05D001602 1.8e-06 58.9 79 36.7
Zm00001eb163540 Zea mays HOM05D001371 ORTHO05D001319 1.8e-06 58.9 190 30.0
TAR374G0888 Trochodendron aralioides HOM05D002010 ORTHO05D001602 2.4e-06 58.5 107 29.9
arahy.Tifrunner.gnm1.ann1.7RZ9ZD Arachis hypogaea HOM05D001371 ORTHO05D001319 9.0e-06 56.6 179 26.8


User provided reference genes

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