Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.7e-65 250.8 126 100.0
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.7e-65 250.8 126 100.0
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.3e-64 249.6 126 98.4
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.4e-63 246.1 126 97.6
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.4e-63 246.1 126 97.6
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.5e-62 241.1 136 90.4
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 7.2e-60 233.8 126 92.9
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 3.4e-49 198.4 126 78.6
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.7e-48 196.1 121 81.8
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 6.4e-48 194.1 126 77.0
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.3e-45 186.4 123 76.4
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.7e-45 186.0 126 72.2
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 3.0e-45 185.3 119 78.2
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 3.0e-45 185.3 124 73.4
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 1.5e-44 183.0 123 72.4
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.5e-44 183.0 126 73.0
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 9.5e-44 180.3 122 73.8
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.6e-43 179.5 122 73.8
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.6e-43 179.5 124 71.8
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 2.1e-43 179.1 122 70.5
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 2.1e-43 179.1 124 71.0
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 2.8e-43 178.7 126 70.6
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.1e-42 176.8 120 75.0
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.1e-42 176.8 126 69.8
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.1e-42 176.8 118 73.7
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.3e-42 175.6 126 69.8
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 5.2e-42 174.5 126 69.8
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 6.8e-42 174.1 122 69.7
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 6.8e-42 174.1 124 71.8
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 6.8e-42 174.1 126 69.0
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 8.9e-42 173.7 125 72.8
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 8.9e-42 173.7 126 69.8
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.2e-41 173.3 124 71.0
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.2e-41 173.3 125 72.0
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 2.6e-41 172.2 125 71.2
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 3.4e-41 171.8 122 69.7
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 5.8e-41 171.0 126 67.5
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 9.8e-41 170.2 126 67.5
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 2.2e-40 169.1 126 66.7
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 2.2e-40 169.1 126 66.7
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 3.7e-40 168.3 122 68.9
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 3.7e-40 168.3 161 58.4
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-39 166.8 123 71.5
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 1.9e-39 166.0 126 65.9
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 2.4e-39 165.6 120 70.0
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 2.4e-39 165.6 126 63.5
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 4.1e-39 164.9 122 69.7
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 5.4e-39 164.5 122 66.4
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.2e-38 163.3 122 67.2
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 1.6e-38 162.9 123 65.9
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.7e-38 162.2 123 69.9
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 3.5e-38 161.8 122 66.4
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 6.0e-38 161.0 122 64.8
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 7.8e-38 160.6 109 71.6
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 8.6e-37 157.1 126 61.9
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 3.3e-36 155.2 122 63.9
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 4.3e-36 154.8 122 63.9
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 4.3e-36 154.8 115 67.0
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 4.3e-36 154.8 95 80.0
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 5.6e-36 154.5 117 67.5
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 7.3e-36 154.1 116 68.1
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.6e-35 152.9 122 62.3
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 2.8e-35 152.1 115 63.5
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 3.6e-35 151.8 110 69.1
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 1.4e-34 149.8 110 67.3
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 1.4e-34 149.8 110 67.3
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 1.4e-34 149.8 110 66.4
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.3e-34 149.1 154 55.2
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 3.1e-34 148.7 115 62.6
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.1e-34 148.7 115 62.6
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 5.2e-34 147.9 115 61.7
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 5.2e-34 147.9 115 61.7
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 5.2e-34 147.9 115 61.7
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 5.2e-34 147.9 115 61.7
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 6.8e-34 147.5 132 59.8
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 6.8e-34 147.5 113 66.4
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 1.2e-33 146.7 117 61.5
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 2.6e-33 145.6 115 60.0
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 3.4e-33 145.2 120 57.5
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 4.4e-33 144.8 115 60.0
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 1.7e-32 142.9 121 58.7
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.7e-32 142.9 115 60.0
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 3.7e-32 141.7 121 56.2
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 6.4e-32 141.0 116 60.3
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.1e-31 140.2 117 59.0
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 4.1e-31 138.3 86 80.2
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 5.4e-31 137.9 115 60.0
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 2.7e-30 135.6 89 70.8
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 3.5e-30 135.2 99 67.7
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 4.6e-30 134.8 90 76.7
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 7.8e-30 134.0 116 56.0
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 1.3e-29 133.3 114 64.0
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.3e-29 133.3 126 53.2
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 1.7e-29 132.9 203 42.4
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.1e-28 130.2 107 58.9
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 5.6e-28 127.9 87 70.1
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.4e-26 123.2 87 67.8
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.1e-26 122.1 87 67.8
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.1e-26 122.1 87 67.8
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.2e-25 120.2 108 60.2
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 3.4e-25 118.6 88 65.9
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 7.6e-25 117.5 114 50.9
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 7.8e-22 107.5 82 63.4
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.3e-21 106.7 122 45.1
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 5.1e-21 104.8 89 58.4
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.5e-20 103.2 86 60.5
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 8.1e-19 97.4 111 47.7
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 9.9e-09 63.9 82 39.0


User provided reference genes

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