Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3500 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.4e-159 566.2 284 100.0
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 9.1e-127 457.2 237 97.9
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.0e-126 456.1 237 97.5
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.4e-122 443.4 237 93.7
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 6.7e-122 441.0 237 93.2
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 2.9e-101 372.5 237 81.0
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 1.1e-74 284.3 237 64.6
MD17G1141700 Malus domestica HOM05D006994 ORTHO05D008229 7.8e-62 241.5 232 58.6
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 1.1e-50 204.5 232 50.0
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 4.5e-33 146.0 210 45.2
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 1.3e-32 144.4 248 41.5
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 3.0e-29 133.3 242 38.8
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 5.1e-29 132.5 244 37.7
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 6.7e-29 132.1 259 41.3
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 3.3e-28 129.8 242 38.4
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 2.2e-27 127.1 240 40.8
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 2.8e-27 126.7 243 40.7
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 8.2e-27 125.2 245 38.4
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 5.3e-26 122.5 242 37.2
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 1.2e-25 121.3 238 36.1
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 7.7e-25 118.6 236 34.7
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 1.2e-22 111.3 236 38.6
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 2.7e-22 110.2 252 36.5
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 6.7e-21 105.5 175 41.1
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 1.1e-18 98.2 245 32.7
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 1.4e-18 97.8 221 32.6
Phvul.006G035100 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 4.1e-18 96.3 245 33.5
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 9.1e-18 95.1 228 32.5
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 3.4e-17 93.2 240 34.2
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 1.0e-16 91.7 245 33.1
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 2.2e-16 90.5 245 33.1
TPR.G12670 Trifolium pratense HOM05D006994 ORTHO05D008229 2.2e-16 90.5 197 34.5
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 3.8e-16 89.7 200 35.5
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 8.5e-16 88.6 242 33.5
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 2.5e-15 87.0 234 29.9
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 2.5e-15 87.0 202 36.1
Glyma.18G104900 Glycine max HOM05D006994 ORTHO05D008229 5.5e-15 85.9 262 29.8
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 1.6e-14 84.3 204 34.8
Lalb_Chr04g0248671 Lupinus albus HOM05D006994 ORTHO05D008229 2.1e-14 84.0 253 30.0
Medtr5g091810 Medicago truncatula HOM05D006994 ORTHO05D008229 7.9e-14 82.0 254 30.7
arahy.Tifrunner.gnm1.ann1.0VWG63 Arachis hypogaea HOM05D006994 ORTHO05D008229 2.3e-13 80.5 230 30.0
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 3.0e-13 80.1 238 30.7
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 3.9e-13 79.7 220 34.5
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 5.7e-12 75.9 177 35.0
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 9.7e-12 75.1 212 34.4
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 9.7e-12 75.1 243 32.5
Psat0s1339g0080 Pisum sativum HOM05D006994 ORTHO05D008229 2.8e-11 73.6 253 28.5
Ca_06289_v3 Cicer arietinum L. HOM05D006994 ORTHO05D008229 3.7e-11 73.2 241 29.5
LjContig00310g0024424 Lotus japonicus HOM05D006994 ORTHO05D008229 1.2e-09 68.2 248 27.8
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 3.5e-09 66.6 231 31.6
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 5.9e-09 65.9 153 35.3
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 1.7e-08 64.3 220 29.5
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 2.7e-06 57.0 229 26.6


User provided reference genes

Program Settings