Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 1.5e-34 149.1 78 100.0
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 2.3e-32 141.7 80 96.2
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.2e-31 139.4 80 95.0
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 8.5e-27 123.2 80 83.8
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 1.4e-21 105.9 76 72.4
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 3.3e-18 94.7 77 64.9
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 4.2e-18 94.4 82 64.6
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 5.5e-18 94.0 79 69.6
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 8.0e-17 90.1 82 62.2
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 8.0e-17 90.1 82 62.2
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.0e-16 89.7 81 63.0
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 2.3e-16 88.6 77 63.6
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 1.5e-15 85.9 79 68.4
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 2.6e-15 85.1 79 63.3
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 2.6e-15 85.1 67 68.7
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 2.6e-15 85.1 68 69.1
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 2.6e-15 85.1 77 61.0
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 3.4e-15 84.7 82 59.8
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 7.5e-15 83.6 82 59.8
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 7.5e-15 83.6 81 58.0
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 2.2e-14 82.0 83 61.4
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 2.2e-14 82.0 82 58.5
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 3.7e-14 81.3 81 63.0
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 3.7e-14 81.3 81 64.2
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 3.7e-14 81.3 67 67.2
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 4.9e-14 80.9 85 56.5
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 4.9e-14 80.9 82 61.0
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 1.4e-13 79.3 79 57.0
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 2.4e-13 78.6 84 58.3
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 3.2e-13 78.2 81 60.5
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 4.1e-13 77.8 70 62.9
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 5.4e-13 77.4 77 58.4
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 5.4e-13 77.4 80 56.2
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 7.0e-13 77.0 80 56.2
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 9.2e-13 76.6 59 67.8
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 1.6e-12 75.9 83 53.0
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.6e-12 75.9 73 61.6
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.6e-12 75.9 77 58.4
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 1.6e-12 75.9 64 62.5
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.0e-12 75.5 77 57.1
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.0e-12 75.5 80 55.0
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 4.6e-12 74.3 77 57.1
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 4.6e-12 74.3 74 59.5
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 4.6e-12 74.3 57 68.4
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 7.8e-12 73.6 64 60.9
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.0e-11 73.2 63 61.9
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 1.3e-11 72.8 69 58.0
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 2.3e-11 72.0 66 60.6
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 1.1e-10 69.7 58 65.5
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 1.9e-10 68.9 57 63.2
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 1.9e-10 68.9 64 59.4
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.9e-10 68.9 70 54.3
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 5.6e-10 67.4 52 67.3
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 5.6e-10 67.4 55 60.0
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 9.5e-10 66.6 67 59.7
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 4.7e-09 64.3 62 59.7
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 1.4e-08 62.8 57 59.6
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 3.1e-08 61.6 51 62.7
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 4.0e-08 61.2 58 58.6
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 6.8e-08 60.5 51 62.7
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 6.8e-08 60.5 76 51.3
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.5e-07 59.3 71 50.7
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 9.8e-07 56.6 55 54.5
Nn8g38941 Nelumbo nucifera HOM05D008135 ORTHO05D010260 2.9e-06 55.1 65 50.8


User provided reference genes

Program Settings