Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3338 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.0e-73 276.9 135 100.0
FAN02G1315 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-52 208.4 154 72.7
FAN02G4154 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-52 208.4 154 72.7
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.8e-17 92.4 89 47.2
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.8e-17 91.7 83 50.6
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.1e-17 90.9 83 50.6
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-16 90.5 83 49.4
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-16 90.5 83 50.6
FAN12G0049 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-16 90.5 83 50.6
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-16 90.5 83 50.6
FAN20G1631 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-16 89.4 85 47.1
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-16 89.4 83 49.4
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-16 88.6 83 49.4
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-16 88.2 83 49.4
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-16 87.8 83 49.4
FAN26G2394 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-16 87.8 89 47.2
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 86.7 83 49.4
FAN05G4362 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 86.7 83 48.2
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 86.7 83 49.4
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-15 86.3 83 48.2
FAN19G0554 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-15 86.3 81 49.4
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 2.6e-15 85.9 81 43.2
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-15 85.5 83 48.2
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-15 85.5 83 48.2
FAN16G1534 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-14 82.8 90 46.7
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-14 82.4 83 47.0
FAN24G1866 Fragaria x ananassa HOM05D002480 ORTHO05D046333 4.9e-14 81.6 105 52.4
FvH4_2g11910 Fragaria vesca HOM05D002480 ORTHO05D046333 1.9e-13 79.7 105 45.7
FAN21G2545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-13 79.3 90 45.6
FAN09G0095 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.1e-13 77.8 88 45.5
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-12 77.0 74 48.6
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-12 76.3 82 48.8
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 2.7e-12 75.9 91 42.9
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 6.0e-12 74.7 81 37.0
FAN17G1313 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-11 73.9 77 40.3
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.3e-11 73.6 82 37.8
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-11 73.2 86 38.4
FAN18G1129 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-11 72.8 90 42.2
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-11 72.8 82 37.8
FvH4_1g27932 Fragaria vesca HOM05D002480 ORTHO05D003145 3.0e-11 72.4 75 42.7
FAN15G2755 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.9e-11 72.0 61 60.7
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 6.7e-11 71.2 77 39.0
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 6.7e-11 71.2 89 43.8
FAN14G5134 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.7e-11 71.2 61 52.5
FAN15G1816 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.7e-11 70.9 66 45.5
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-10 69.3 98 34.7
FAN14G0992 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-10 68.9 89 34.8
FAN18G1209 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.3e-10 68.6 114 38.6
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-10 68.2 85 42.4
FAN09G2457 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-10 68.2 128 31.2
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 1.6e-09 66.6 77 37.7
FAN05G4151 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-09 66.6 89 33.7
FAN06G1359 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-09 66.2 66 48.5
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-09 66.2 66 40.9
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-09 65.9 75 40.0
FAN14G0918 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-09 65.9 51 56.9
FAN14G2911 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-09 65.9 51 56.9
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-09 65.9 70 41.4
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 4.8e-09 65.1 91 34.1
FAN13G3053 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.8e-09 65.1 84 42.9
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.2e-09 64.7 121 33.1
FvH4_7g18780 Fragaria vesca HOM05D002480 ORTHO05D003145 8.2e-09 64.3 82 34.1
SEGI_27954 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 8.2e-09 64.3 77 37.7
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 1.1e-08 63.9 134 27.6
SEGI_31286 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.8e-08 63.2 77 37.7
FAN04G3005 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-08 62.8 85 38.8
FAN15G2272 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-08 62.8 96 34.4
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 3.1e-08 62.4 63 36.5
FAN16G1666 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.1e-08 62.4 76 39.5
SEGI_38727 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.1e-08 62.4 72 38.9
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 4.0e-08 62.0 62 46.8
LjContig00408g0002404 Lotus japonicus HOM05D000003 ORTHO05D000126 4.0e-08 62.0 77 32.5
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-08 61.2 89 37.1
FAN06G4463 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-08 61.2 75 37.3
SEGI_08743 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.5e-07 60.1 76 34.2
SEGI_06805 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.0e-07 59.7 77 36.4
SEGI_06854 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.0e-07 59.7 76 35.5
SEGI_16042 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.0e-07 59.7 103 32.0
SEGI_24915 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.6e-07 59.3 77 37.7
SEGI_36704 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.5e-07 58.5 77 33.8
FvH4_2g14911 Fragaria vesca HOM05D003375 ORTHO05D004719 5.8e-07 58.2 76 36.8
RcHm_v2.0_Chr1g0342591 Rosa chinensis HOM05D000003 ORTHO05D000007 5.8e-07 58.2 82 32.9
SEGI_18903 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 5.8e-07 58.2 74 36.5
SEGI_31759 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 5.8e-07 58.2 76 34.2
SEGI_32751 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 5.8e-07 58.2 74 36.5
FAN18G1519 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.6e-07 57.8 52 44.2
FAN27G1221 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.6e-07 57.8 87 33.3
RcHm_v2.0_Chr2g0146151 Rosa chinensis HOM05D000003 ORTHO05D000006 7.6e-07 57.8 82 32.9
SEGI_37301 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 7.6e-07 57.8 77 35.1
vmacro17797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 7.6e-07 57.8 73 35.6
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-06 57.4 83 37.3
FAN21G3182 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-06 57.4 75 37.3
SEGI_04073 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.0e-06 57.4 64 37.5
SEGI_19631 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.0e-06 57.4 73 35.6
FvH4_7g08120 Fragaria vesca HOM05D002480 ORTHO05D003145 1.3e-06 57.0 54 40.7
FAN06G0850 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-06 57.0 54 40.7
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-06 57.0 58 41.4
FAN06G2080 Fragaria x ananassa HOM05D000125 ORTHO05D000120 1.7e-06 56.6 59 40.7
RcHm_v2.0_Chr2g0171821 Rosa chinensis HOM05D000003 ORTHO05D000007 1.7e-06 56.6 82 30.5
SEGI_06281 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.7e-06 56.6 75 29.3
SEGI_26126 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.7e-06 56.6 75 29.3
SEGI_31600 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.7e-06 56.6 81 29.6
SEGI_07574 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.2e-06 56.2 74 33.8
FvH4_1g28741 Fragaria vesca HOM05D000003 ORTHO05D000007 2.9e-06 55.8 82 32.9
FAN10G3968 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-06 55.8 75 34.7
FAN11G1368 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-06 55.8 71 38.0
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 2.9e-06 55.8 93 30.1
RcHm_v2.0_Chr6g0265791 Rosa chinensis HOM05D003375 ORTHO05D004719 2.9e-06 55.8 77 29.9
SEGI_01985 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.9e-06 55.8 76 35.5
FvH4_5g24922 Fragaria vesca HOM05D002480 ORTHO05D003145 3.8e-06 55.5 65 41.5
FvH4_6g41261 Fragaria vesca HOM05D002480 ORTHO05D003145 3.8e-06 55.5 61 39.3
QL03p070144 Quercus lobata HOM05D000003 ORTHO05D000126 3.8e-06 55.5 73 32.9
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 3.8e-06 55.5 102 29.4
PGR142G4317 Punica granatum HOM05D000003 ORTHO05D000007 4.9e-06 55.1 77 26.0
QL11p036810 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-06 55.1 75 29.3
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 4.9e-06 55.1 82 30.5
SEGI_02511 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.9e-06 55.1 77 33.8
SEGI_11412 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.9e-06 55.1 77 32.5
SEGI_22332 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.9e-06 55.1 72 34.7
SEGI_36909 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.9e-06 55.1 72 34.7
TWI39G0375 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 4.9e-06 55.1 84 36.9
TWI56G0633 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 4.9e-06 55.1 84 36.9
FvH4_4g06577 Fragaria vesca HOM05D002480 ORTHO05D003145 6.5e-06 54.7 63 42.9
FAN13G1471 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.5e-06 54.7 68 39.7
FAN14G1490 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.5e-06 54.7 61 37.7
RcHm_v2.0_Chr3g0492931 Rosa chinensis HOM05D000003 ORTHO05D000007 6.5e-06 54.7 72 36.1
SEGI_24838 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 6.5e-06 54.7 64 40.6
FAN26G3107 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.4e-06 54.3 63 39.7


User provided reference genes

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