Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3293 Fragaria x ananassa HOM05D008101 ORTHO05D010163 9.8e-23 109.4 60 100.0
FvH4_6g48300 Fragaria vesca HOM05D008101 ORTHO05D010163 3.4e-15 84.3 57 78.9
FAN09G0090 Fragaria x ananassa HOM05D008101 ORTHO05D010163 3.4e-15 84.3 57 78.9
FAN14G5148 Fragaria x ananassa HOM05D008101 ORTHO05D010163 3.4e-15 84.3 57 78.9
RcHm_v2.0_Chr2g0167501 Rosa chinensis HOM05D008101 ORTHO05D010163 7.5e-15 83.2 48 93.8
RcHm_v2.0_Chr2g0167541 Rosa chinensis HOM05D008101 ORTHO05D010163 7.5e-15 83.2 48 93.8
FAN09G1556 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.3e-14 82.4 48 93.8
RcHm_v2.0_Chr2g0167591 Rosa chinensis HOM05D008101 ORTHO05D010163 2.9e-14 81.3 48 91.7
FAN02G2446 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.4e-13 79.0 48 89.6
Dinv33773 Davidia involucrata HOM05D008101 ORTHO05D010163 2.3e-11 71.6 48 75.0
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 3.0e-11 71.2 48 77.1
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 3.9e-11 70.9 48 75.0
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 6.6e-11 70.1 48 72.9
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 1.1e-10 69.3 48 70.8
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 1.1e-10 69.3 48 70.8
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 1.5e-10 68.9 48 68.8
FAN05G0138 Fragaria x ananassa HOM05D000576 ORTHO05D010163 1.9e-10 68.6 41 92.7
FAN23G1982 Fragaria x ananassa HOM05D000576 ORTHO05D010163 1.9e-10 68.6 41 92.7
CiPaw.03G024700 Carya illinoinensis HOM05D008101 ORTHO05D010163 2.5e-10 68.2 48 72.9
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 5.6e-10 67.0 48 72.9
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 2.1e-09 65.1 48 68.8
SEGI_19148 Sequoiadendron giganteum HOM05D008101 ORTHO05D010163 1.1e-08 62.8 51 60.8
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 1.8e-08 62.0 48 66.7
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 6.8e-08 60.1 48 68.8
Aqoxy3G03441 Aquilegia oxysepala HOM05D008101 ORTHO05D010163 8.9e-08 59.7 52 61.5
Nn4g23220 Nelumbo nucifera HOM05D008101 ORTHO05D010163 8.9e-08 59.7 48 60.4
PGR083G0374 Punica granatum HOM05D008101 ORTHO05D010163 8.9e-08 59.7 48 62.5
Rhsim10G0036400 Rhododendron simsii HOM05D018356 ORTHO05D010163 8.9e-08 59.7 48 62.5
Phvul.004G030000 Phaseolus vulgaris HOM05D008101 ORTHO05D010163 3.4e-07 57.8 48 64.6
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 4.4e-07 57.4 48 62.5
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 1.3e-06 55.8 48 62.5
Medtr6g012640 Medicago truncatula HOM05D008101 ORTHO05D010163 1.7e-06 55.5 48 62.5
EL10Ac9g21543 Beta vulgaris HOM05D008101 ORTHO05D010163 2.2e-06 55.1 48 60.4
SalBow1G0549 Salvia bowleyana HOM05D008101 ORTHO05D010163 4.9e-06 53.9 48 62.5
SalBow1G6176 Salvia bowleyana HOM05D008101 ORTHO05D010163 4.9e-06 53.9 48 62.5
CAN.G206.165 Capsicum annuum HOM05D008101 ORTHO05D010163 6.4e-06 53.5 48 56.2
Os04g0460350 Oryza sativa ssp. japonica HOM05D008101 ORTHO05D010163 6.4e-06 53.5 48 56.2
Sed0001905 Sechium edule HOM05D008101 ORTHO05D010163 6.4e-06 53.5 48 58.3
Nn3g17291 Nelumbo nucifera HOM05D008101 ORTHO05D010163 8.4e-06 53.1 48 52.1
SalBow8G3752 Salvia bowleyana HOM05D008101 ORTHO05D010163 8.4e-06 53.1 48 62.5


User provided reference genes

Program Settings