Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 9.2e-90 333.6 173 100.0
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 3.1e-85 318.5 173 91.9
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.6e-84 315.5 171 91.8
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 4.4e-84 314.7 171 94.2
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 1.3e-80 303.1 166 91.6
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 9.0e-53 210.7 178 70.8
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 8.8e-16 87.8 132 41.7
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 8.3e-14 81.3 127 41.7
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 1.1e-13 80.9 151 39.7
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 2.4e-13 79.7 125 37.6
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 7.0e-13 78.2 136 36.8
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.6e-12 77.0 124 43.5
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.6e-12 77.0 124 43.5
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 5.9e-12 75.1 109 38.5
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.0e-11 74.3 135 38.5
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 1.3e-11 73.9 68 57.4
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 2.2e-11 73.2 123 39.0
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 2.9e-11 72.8 68 54.4
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 3.8e-11 72.4 109 40.4
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 5.0e-11 72.0 126 38.1
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 5.0e-11 72.0 85 45.9
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 1.1e-10 70.9 134 39.6
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.1e-10 70.9 126 38.1
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 1.5e-10 70.5 133 36.8
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 1.5e-10 70.5 131 36.6
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 1.9e-10 70.1 133 38.3
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 2.5e-10 69.7 98 42.9
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 3.2e-10 69.3 90 43.3
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 7.2e-10 68.2 127 37.8
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 7.2e-10 68.2 105 41.0
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 7.2e-10 68.2 105 41.9
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 7.2e-10 68.2 126 41.3
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 7.2e-10 68.2 76 47.4
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 9.4e-10 67.8 86 47.7
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.2e-09 67.4 127 36.2
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 1.6e-09 67.0 100 41.0
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.6e-09 67.0 86 47.7
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.6e-09 67.0 135 36.3
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 3.6e-09 65.9 127 35.4
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 3.6e-09 65.9 123 38.2
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 3.6e-09 65.9 82 47.6
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 4.7e-09 65.5 70 48.6
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 8.0e-09 64.7 189 32.3
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 1.0e-08 64.3 143 36.4
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 1.8e-08 63.5 126 35.7
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 1.8e-08 63.5 139 32.4
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 1.8e-08 63.5 88 40.9
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 2.3e-08 63.2 126 37.3
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 3.0e-08 62.8 88 43.2
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 3.0e-08 62.8 138 32.6
Phvul.004G061700 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 3.0e-08 62.8 43 58.1
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 4.0e-08 62.4 126 34.9
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 4.0e-08 62.4 120 37.5
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 4.0e-08 62.4 138 32.6
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 5.2e-08 62.0 110 40.0
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 6.8e-08 61.6 88 42.0
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 6.8e-08 61.6 127 35.4
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 8.8e-08 61.2 133 34.6
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 8.8e-08 61.2 108 37.0
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 8.8e-08 61.2 97 40.2
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 8.8e-08 61.2 84 41.7
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 1.2e-07 60.8 89 41.6
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 1.2e-07 60.8 89 41.6
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 1.5e-07 60.5 37 64.9
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.5e-07 60.5 133 36.1
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 2.6e-07 59.7 101 37.6
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 2.6e-07 59.7 89 41.6
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 3.4e-07 59.3 66 43.9
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 3.4e-07 59.3 38 63.2
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 5.7e-07 58.5 123 35.0
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 7.5e-07 58.2 68 47.1
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 7.5e-07 58.2 80 37.5
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 7.5e-07 58.2 151 29.1
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 9.8e-07 57.8 89 40.4
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.3e-06 57.4 97 32.0
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 1.3e-06 57.4 126 35.7
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.2e-06 56.6 39 61.5
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 2.8e-06 56.2 67 40.3
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 2.8e-06 56.2 164 29.9
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 3.7e-06 55.8 133 32.3
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 3.7e-06 55.8 94 38.3
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 3.7e-06 55.8 39 56.4
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 4.9e-06 55.5 124 33.1
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 4.9e-06 55.5 100 33.0
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 6.3e-06 55.1 43 51.2
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 8.3e-06 54.7 141 31.2


User provided reference genes

Program Settings