Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3253 Fragaria x ananassa HOM05D000330 ORTHO05D022711 5.1e-52 207.6 115 100.0
FAN05G3335 Fragaria x ananassa HOM05D000330 ORTHO05D022711 2.4e-49 198.7 115 95.7
Glyma.09G119700 Glycine max HOM05D000330 ORTHO05D000209 5.9e-08 61.2 58 55.2
Gohir.A03G122900 Gossypium hirsutum HOM05D000330 ORTHO05D000209 5.9e-08 61.2 54 57.4
Gohir.D02G145500 Gossypium hirsutum HOM05D000330 ORTHO05D000209 5.9e-08 61.2 54 57.4
Gorai.005G162900 Gossypium raimondii HOM05D000330 ORTHO05D000209 5.9e-08 61.2 54 57.4
GSVIVG01011780001 Vitis vinifera HOM05D000330 ORTHO05D000209 5.9e-08 61.2 54 59.3
CANSAT25G2343 Cannabis sativa HOM05D000330 ORTHO05D000209 7.7e-08 60.8 75 46.7
FvH4_4g32220 Fragaria vesca HOM05D000330 ORTHO05D000209 7.7e-08 60.8 54 59.3
FAN17G3047 Fragaria x ananassa HOM05D000330 ORTHO05D000209 7.7e-08 60.8 54 59.3
FAN22G0088 Fragaria x ananassa HOM05D000330 ORTHO05D000209 7.7e-08 60.8 54 59.3
Hma1.2p1_0951F.1_g240740 Hydrangea macrophylla HOM05D000330 ORTHO05D000209 7.7e-08 60.8 54 55.6
MD13G1027100 Malus domestica HOM05D000330 ORTHO05D000209 7.7e-08 60.8 54 59.3
Prupe.1G322800 Prunus persica HOM05D000330 ORTHO05D000209 7.7e-08 60.8 54 59.3
FAN09G1932 Fragaria x ananassa HOM05D000330 ORTHO05D022711 1.0e-07 60.5 34 76.5
MD16G1030200 Malus domestica HOM05D000330 ORTHO05D000209 1.0e-07 60.5 75 46.7
PGR119G1933 Punica granatum HOM05D000330 ORTHO05D000209 1.0e-07 60.5 75 46.7
ClCG10G006960 Citrullus lanatus HOM05D000330 ORTHO05D000209 1.3e-07 60.1 74 48.6
Glyma.07G165800 Glycine max HOM05D000330 ORTHO05D000209 1.3e-07 60.1 58 55.2
Medtr1g108280 Medicago truncatula HOM05D000330 ORTHO05D000209 1.3e-07 60.1 75 46.7
Psat2g188640 Pisum sativum HOM05D000330 ORTHO05D000209 1.3e-07 60.1 75 46.7
QL01p002089 Quercus lobata HOM05D000330 ORTHO05D000209 1.3e-07 60.1 54 57.4
TPR.G30150 Trifolium pratense HOM05D000330 ORTHO05D000209 1.3e-07 60.1 75 45.3
Lj5g0008411 Lotus japonicus HOM05D000330 ORTHO05D000209 1.7e-07 59.7 51 60.8
Lj5g0010065 Lotus japonicus HOM05D000330 ORTHO05D000209 1.7e-07 59.7 51 60.8
TAR206G0001 Trochodendron aralioides HOM05D000330 ORTHO05D000209 1.7e-07 59.7 31 83.9
TAR371G0710 Trochodendron aralioides HOM05D000330 ORTHO05D000209 1.7e-07 59.7 31 83.9
FAN07G1975 Fragaria x ananassa HOM05D000330 ORTHO05D000209 2.2e-07 59.3 54 57.4
MSTRG.13575 Avicennia marina HOM05D000330 ORTHO05D000209 2.9e-07 58.9 31 80.6
COL.COLO4_20459 Corchorus olitorius HOM05D000330 ORTHO05D000209 2.9e-07 58.9 31 80.6
Dinv13003 Davidia involucrata HOM05D000330 ORTHO05D000209 2.9e-07 58.9 31 80.6
Duzib268G1130 Durio zibethinus HOM05D000330 ORTHO05D000209 2.9e-07 58.9 31 80.6
Glyma.10G264600 Glycine max HOM05D000330 ORTHO05D000209 2.9e-07 58.9 58 53.4
Gohir.A01G153400 Gossypium hirsutum HOM05D000330 ORTHO05D000209 2.9e-07 58.9 30 86.7
Gohir.D01G099800 Gossypium hirsutum HOM05D000330 ORTHO05D000209 2.9e-07 58.9 30 86.7
Gorai.002G180500 Gossypium raimondii HOM05D000330 ORTHO05D000209 2.9e-07 58.9 30 86.7
Lalb_Chr17g0338711 Lupinus albus HOM05D000330 ORTHO05D000209 2.9e-07 58.9 58 51.7
Thecc.02G279100 Theobroma cacao HOM05D000330 ORTHO05D000209 2.9e-07 58.9 31 80.6
TAR629G3009 Trochodendron aralioides HOM05D000330 ORTHO05D000209 2.9e-07 58.9 31 83.9
Atru.chr11.409 Acer truncatum HOM05D000330 ORTHO05D000209 3.8e-07 58.5 51 56.9
Cpa.g.sc65.120 Carica papaya HOM05D000330 ORTHO05D000209 3.8e-07 58.5 31 83.9
Phvul.003G022600 Phaseolus vulgaris HOM05D000330 ORTHO05D000209 3.8e-07 58.5 58 51.7
Phvul.007G037400 Phaseolus vulgaris HOM05D000330 ORTHO05D000209 3.8e-07 58.5 51 58.8
CSS0012028 Camellia sinensis var. sinensis HOM05D000330 ORTHO05D000209 5.0e-07 58.2 30 80.0
DCAR_030210 Daucus carota HOM05D000330 ORTHO05D000209 5.0e-07 58.2 54 55.6
Duzib251G0260 Durio zibethinus HOM05D000330 ORTHO05D000209 5.0e-07 58.2 31 77.4
Actinidia14949 Actinidia chinensis HOM05D000330 ORTHO05D000209 6.5e-07 57.8 75 44.0
Actinidia15248 Actinidia chinensis HOM05D000330 ORTHO05D000209 6.5e-07 57.8 75 44.0
Actinidia36684 Actinidia chinensis HOM05D000330 ORTHO05D000209 6.5e-07 57.8 75 44.0
Lj2g0018102 Lotus japonicus HOM05D000330 ORTHO05D000209 6.5e-07 57.8 26 96.2
Potri.010G114800 Populus trichocarpa HOM05D000330 ORTHO05D000209 6.5e-07 57.8 54 55.6
RcHm_v2.0_Chr4g0440961 Rosa chinensis HOM05D000330 ORTHO05D000209 6.5e-07 57.8 31 77.4
SGA_v2.0_scaffold39G15151 Striga asiatica HOM05D000330 ORTHO05D000209 6.5e-07 57.8 31 74.2
Dinv05149 Davidia involucrata HOM05D000330 ORTHO05D000209 8.5e-07 57.4 54 55.6
Manes.17G075100 Manihot esculenta HOM05D000330 ORTHO05D000209 8.5e-07 57.4 31 77.4
Nn4g24094 Nelumbo nucifera HOM05D000330 ORTHO05D000209 8.5e-07 57.4 41 56.1
Sed0016898 Sechium edule HOM05D000330 ORTHO05D000209 8.5e-07 57.4 31 80.6
vmacro10626 Vaccinium macrocarpon HOM05D000330 ORTHO05D000209 8.5e-07 57.4 31 77.4
Ciclev10015447m.g Citrus clementina HOM05D000330 ORTHO05D000209 1.1e-06 57.0 31 74.2
MELO3C016510.2 Cucumis melo HOM05D000330 ORTHO05D000209 1.1e-06 57.0 31 80.6
Lalb_Chr02g0145471 Lupinus albus HOM05D000330 ORTHO05D000209 1.1e-06 57.0 58 53.4
Lalb_Chr06g0165611 Lupinus albus HOM05D000330 ORTHO05D000209 1.1e-06 57.0 58 53.4
VMungo0720G0854 Vigna mungo HOM05D000330 ORTHO05D000209 1.1e-06 57.0 51 56.9
CiPaw.06G013100 Carya illinoinensis HOM05D000330 ORTHO05D000209 1.4e-06 56.6 58 48.3
Ca_11093_v3 Cicer arietinum L. HOM05D000330 ORTHO05D000209 1.4e-06 56.6 50 58.0
CsaV3_3G006330 Cucumis sativus L. HOM05D000330 ORTHO05D000209 1.4e-06 56.6 30 83.3
Eucgr.G02200 Eucalyptus grandis HOM05D000330 ORTHO05D000209 1.4e-06 56.6 31 77.4
Psat2g188520 Pisum sativum HOM05D000330 ORTHO05D000209 1.4e-06 56.6 74 45.9
Sed0017637 Sechium edule HOM05D000330 ORTHO05D000209 1.4e-06 56.6 30 83.3
CAN.G1693.16 Capsicum annuum HOM05D000330 ORTHO05D000209 1.9e-06 56.2 31 77.4
Migut.E00411 Erythranthe guttata HOM05D000330 ORTHO05D000209 1.9e-06 56.2 31 74.2
Glyma.20G125800 Glycine max HOM05D000330 ORTHO05D000209 1.9e-06 56.2 51 56.9
Nn091s42873 Nelumbo nucifera HOM05D000330 ORTHO05D000209 1.9e-06 56.2 31 77.4
Rhsim09G0100200 Rhododendron simsii HOM05D000330 ORTHO05D000209 1.9e-06 56.2 31 77.4
Aqoxy3G03962 Aquilegia oxysepala HOM05D000330 ORTHO05D000209 2.5e-06 55.8 31 77.4
arahy.Tifrunner.gnm1.ann1.R43A5K Arachis hypogaea HOM05D000330 ORTHO05D000209 2.5e-06 55.8 52 55.8
Cc11_g08900 Coffea canephora HOM05D000330 ORTHO05D000209 2.5e-06 55.8 25 96.0
Nitab4.5_0006134g0070 Nicotiana tabacum HOM05D000330 ORTHO05D000209 2.5e-06 55.8 31 77.4
Nitab4.5_0013424g0010 Nicotiana tabacum HOM05D000330 ORTHO05D000209 2.5e-06 55.8 31 77.4
TAR374G1164 Trochodendron aralioides HOM05D000330 ORTHO05D000209 2.5e-06 55.8 31 77.4
ClCG05G022170 Citrullus lanatus HOM05D000330 ORTHO05D000209 3.2e-06 55.5 54 51.9
Peaxi162Scf00205g00219 Petunia axillaris HOM05D000330 ORTHO05D000209 3.2e-06 55.5 31 77.4
Sc04g0005750 Simmondsia chinensis HOM05D000330 ORTHO05D000209 4.2e-06 55.1 30 80.0
Solyc05g008340.3 Solanum lycopersicum HOM05D000330 ORTHO05D000209 4.2e-06 55.1 31 77.4
Aqoxy3G00146 Aquilegia oxysepala HOM05D000330 ORTHO05D000209 5.5e-06 54.7 31 71.0
arahy.Tifrunner.gnm1.ann1.FE4WD3 Arachis hypogaea HOM05D000330 ORTHO05D000209 5.5e-06 54.7 51 56.9
MSTRG.2185 Avicennia marina HOM05D000330 ORTHO05D000209 5.5e-06 54.7 35 71.4
EL10Ac6g14249 Beta vulgaris HOM05D000330 ORTHO05D000209 5.5e-06 54.7 31 67.7
MELO3C012306.2 Cucumis melo HOM05D000330 ORTHO05D000209 7.2e-06 54.3 54 50.0
Lj3A875G63 Lonicera japonica HOM05D000330 ORTHO05D000209 7.2e-06 54.3 31 74.2
TAR622G1232 Trochodendron aralioides HOM05D000330 ORTHO05D022711 7.2e-06 54.3 26 88.5
unitig_8.g3989 Utricularia gibba HOM05D000330 ORTHO05D000209 7.2e-06 54.3 31 71.0
AL2G30650 Arabidopsis lyrata HOM05D000330 ORTHO05D000209 9.4e-06 53.9 31 71.0
Haze_11027 Corylus avellana HOM05D000330 ORTHO05D000209 9.4e-06 53.9 33 69.7
Lalb_Chr10g0096291 Lupinus albus HOM05D000330 ORTHO05D000209 9.4e-06 53.9 26 84.6
Os04g0301700 Oryza sativa ssp. japonica HOM05D000330 ORTHO05D000209 9.4e-06 53.9 36 69.4
PSO063G6603 Papaver somniferum HOM05D000330 ORTHO05D000209 9.4e-06 53.9 75 38.7
PSO782G0751 Papaver somniferum HOM05D000330 ORTHO05D000209 9.4e-06 53.9 75 38.7
THA.LOC104823020 Tarenaya hassleriana HOM05D000330 ORTHO05D000209 9.4e-06 53.9 31 71.0
unitig_24.g30590 Utricularia gibba HOM05D000330 ORTHO05D000209 9.4e-06 53.9 26 88.5
VMungo1215G0720 Vigna mungo HOM05D000330 ORTHO05D000209 9.4e-06 53.9 57 49.1


User provided reference genes

Program Settings