Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 0.0e+00 1077.8 581 100.0
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 8.5e-305 1049.7 581 97.8
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.8e-259 899.0 581 86.2
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.2e-258 896.3 581 85.5
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 3.4e-221 771.9 551 80.4
FAN14G0987 Fragaria x ananassa HOM05D008555 ORTHO05D010760 2.9e-180 636.0 369 97.6
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 1.9e-155 553.5 554 60.5
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 6.1e-154 548.5 601 56.7
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 2.4e-89 334.0 620 40.5
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 7.6e-88 328.9 620 40.2
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 1.7e-87 327.8 759 36.8
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 3.9e-76 290.0 686 36.3
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 2.2e-74 284.3 579 38.5
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 1.4e-68 265.0 943 30.3
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 2.8e-58 230.7 605 36.5
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 9.1e-57 225.7 650 33.5
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 6.5e-55 219.5 613 34.3
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 1.4e-52 211.8 657 31.4
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 6.8e-52 209.5 623 33.7
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 2.2e-50 204.5 598 33.8
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 3.7e-50 203.8 576 34.4
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 5.9e-48 196.4 613 31.2
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 1.7e-47 194.9 593 32.9
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 2.2e-47 194.5 282 41.8
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 2.7e-45 187.6 457 34.6
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 2.8e-42 177.6 287 41.8
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 1.6e-40 171.8 334 36.2
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 1.7e-39 168.3 197 44.2
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 6.6e-39 166.4 306 37.6
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 3.6e-37 160.6 210 41.9
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 5.2e-36 156.8 214 41.6
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 3.4e-35 154.1 197 43.1
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 3.4e-35 154.1 187 41.7
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 1.7e-34 151.8 231 42.9
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 1.7e-34 151.8 581 27.9
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 1.4e-33 148.7 267 37.8
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 3.9e-31 140.6 267 39.7
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 4.3e-30 137.1 631 27.4
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 4.7e-29 133.7 519 29.7
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 1.7e-26 125.2 148 46.6
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 2.2e-26 124.8 598 27.6
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 6.4e-26 123.2 401 32.2
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.1e-22 112.5 582 27.8
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 5.4e-17 93.6 657 28.2
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 5.6e-14 83.6 492 28.3
RcHm_v2.0_Chr3g0466991 Rosa chinensis HOM05D008555 ORTHO05D010760 4.3e-06 57.4 30 86.7
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 5.6e-06 57.0 159 28.3


User provided reference genes

Program Settings