Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3089 Fragaria x ananassa HOM05D000397 ORTHO05D013598 2.9e-143 511.9 261 100.0
FAN19G0050 Fragaria x ananassa HOM05D000397 ORTHO05D013598 1.4e-70 270.4 254 67.3
FvH4_2g30370 Fragaria vesca HOM05D000397 ORTHO05D013598 2.4e-65 253.1 185 77.3
FAN05G0769 Fragaria x ananassa HOM05D000397 ORTHO05D013598 7.0e-65 251.5 248 63.7
FAN10G0228 Fragaria x ananassa HOM05D000397 ORTHO05D013598 1.6e-64 250.4 250 65.2
FvH4_1g10360 Fragaria vesca HOM05D000397 ORTHO05D013598 2.2e-58 229.9 164 78.7
FAN25G0062 Fragaria x ananassa HOM05D000397 ORTHO05D002023 1.1e-57 227.6 135 88.9
FAN11G3124 Fragaria x ananassa HOM05D000397 ORTHO05D002023 7.0e-57 224.9 136 86.8
FvH4_3g09240 Fragaria vesca HOM05D000397 ORTHO05D002023 4.5e-56 222.2 136 86.0
FAN21G1716 Fragaria x ananassa HOM05D000397 ORTHO05D002023 4.5e-56 222.2 135 87.4
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 4.0e-52 209.1 164 72.6
FAN14G4692 Fragaria x ananassa HOM05D008609 ORTHO05D010987 4.5e-48 195.7 115 87.0
FvH4_6g42890 Fragaria vesca HOM05D000397 ORTHO05D013598 2.9e-47 193.0 104 94.2
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 8.5e-47 191.4 104 94.2
FvH4_6g20070 Fragaria vesca HOM05D000397 ORTHO05D013598 1.9e-46 190.3 108 89.8
FAN08G0243 Fragaria x ananassa HOM05D000397 ORTHO05D013598 9.4e-46 188.0 114 85.1
FAN17G0906 Fragaria x ananassa HOM05D000397 ORTHO05D013598 9.4e-46 188.0 113 84.1
FvH4_1g10760 Fragaria vesca HOM05D000397 ORTHO05D013598 6.1e-45 185.3 115 85.2
RcHm_v2.0_Chr5g0008381 Rosa chinensis HOM05D000397 ORTHO05D002023 7.0e-41 171.8 136 67.6
FAN14G5342 Fragaria x ananassa HOM05D000397 ORTHO05D013598 3.2e-33 146.4 179 56.4
FAN08G1949 Fragaria x ananassa HOM05D000397 ORTHO05D013598 6.6e-31 138.7 117 66.7
FAN13G0728 Fragaria x ananassa HOM05D000247 ORTHO05D013598 5.2e-20 102.4 129 53.5
FAN10G2469 Fragaria x ananassa HOM05D000247 ORTHO05D013598 7.5e-19 98.6 52 94.2
Prupe.4G047300 Prunus persica HOM05D000397 ORTHO05D002023 7.5e-19 98.6 131 47.3
MD10G1294900 Malus domestica HOM05D000397 ORTHO05D002023 2.5e-14 83.6 133 42.1
FAN19G2686 Fragaria x ananassa HOM05D000397 ORTHO05D207084 2.1e-13 80.5 97 57.7
Haze_06458 Corylus avellana HOM05D000397 ORTHO05D002023 3.6e-13 79.7 140 40.7
CiPaw.09G060200 Carya illinoinensis HOM05D000397 ORTHO05D002023 4.0e-12 76.3 122 40.2
Cfa000459 Carpinus fangiana HOM05D000397 ORTHO05D002023 5.2e-12 75.9 140 39.3
TWI63G1212 Tripterygium wilfordii HOM05D000397 ORTHO05D002023 3.4e-11 73.2 137 40.1
Dinv04308 Davidia involucrata HOM05D000397 ORTHO05D002023 2.2e-10 70.5 133 34.6
TWI38G0318 Tripterygium wilfordii HOM05D000397 ORTHO05D002023 1.1e-09 68.2 137 38.7
TAR624G1261 Trochodendron aralioides HOM05D000397 ORTHO05D002023 2.4e-09 67.0 137 36.5
QL04p075364 Quercus lobata HOM05D000397 ORTHO05D007506 4.1e-09 66.2 130 38.5
Atru.chr10.1878 Acer truncatum HOM05D000397 ORTHO05D002023 5.4e-09 65.9 142 35.2
Duzib235G1412 Durio zibethinus HOM05D000397 ORTHO05D002023 2.7e-08 63.5 137 35.0
CSS0009049 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 6.0e-08 62.4 163 30.7
Medtr2g079300 Medicago truncatula HOM05D000397 ORTHO05D002023 7.8e-08 62.0 154 31.2
TPR.G38966 Trifolium pratense HOM05D000397 ORTHO05D002023 1.0e-07 61.6 153 35.3
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 1.3e-07 61.2 133 33.8
MSTRG.15886 Avicennia marina HOM05D000397 ORTHO05D002023 1.7e-07 60.8 121 33.9
arahy.Tifrunner.gnm1.ann1.8VP3JY Arachis hypogaea HOM05D000397 ORTHO05D002023 3.0e-07 60.1 136 33.8
Ciclev10014282m.g Citrus clementina HOM05D000397 ORTHO05D002023 3.0e-07 60.1 171 29.2
QL05p040325 Quercus lobata HOM05D000397 ORTHO05D002023 3.0e-07 60.1 138 35.5
arahy.Tifrunner.gnm1.ann1.QBTG1H Arachis hypogaea HOM05D000397 ORTHO05D000492 3.9e-07 59.7 136 33.8
PSO675G7294 Papaver somniferum HOM05D000397 ORTHO05D002023 3.9e-07 59.7 132 37.1
Hma1.2p1_0785F.1_g217460 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 5.1e-07 59.3 130 35.4
PSO541G5412 Papaver somniferum HOM05D000397 ORTHO05D002023 5.1e-07 59.3 132 37.1
Actinidia05637 Actinidia chinensis HOM05D000397 ORTHO05D002023 6.6e-07 58.9 128 38.3
Aqoxy1G02427 Aquilegia oxysepala HOM05D000397 ORTHO05D002023 6.6e-07 58.9 111 36.9
Glyma.15G074100 Glycine max HOM05D000397 ORTHO05D002023 6.6e-07 58.9 141 34.8
Hma1.2p1_0885F.1_g232630 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 6.6e-07 58.9 168 31.0
Hma1.2p1_0885F.1_g232635 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 6.6e-07 58.9 168 31.0
ECA240G0650 Erigeron canadensis HOM05D000397 ORTHO05D002023 8.6e-07 58.5 178 29.2
Lj1C844T5 Lonicera japonica HOM05D000397 ORTHO05D002023 8.6e-07 58.5 168 30.4
TPR.G38996 Trifolium pratense HOM05D000397 ORTHO05D002023 1.1e-06 58.2 154 35.1
CSS0024633 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 1.5e-06 57.8 81 44.4
CSS0048812 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 1.5e-06 57.8 81 44.4
CSS0002760 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 1.9e-06 57.4 81 43.2
CANSAT35G0162 Cannabis sativa HOM05D000397 ORTHO05D002023 1.9e-06 57.4 114 37.7
Psat5g244640 Pisum sativum HOM05D000397 ORTHO05D002023 2.5e-06 57.0 138 32.6
Rhsim04G0020600 Rhododendron simsii HOM05D000397 ORTHO05D002023 3.3e-06 56.6 133 32.3
SalBow7G0134 Salvia bowleyana HOM05D000397 ORTHO05D002023 3.3e-06 56.6 138 31.2
Thecc.06G187800 Theobroma cacao HOM05D000397 ORTHO05D002023 3.3e-06 56.6 137 34.3
Ciclev10010518m.g Citrus clementina HOM05D000397 ORTHO05D002023 4.3e-06 56.2 130 34.6
CSS0038494 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 5.6e-06 55.8 81 42.0
Gohir.D10G026500 Gossypium hirsutum HOM05D000397 ORTHO05D002023 7.3e-06 55.5 135 31.9
Gorai.011G027800 Gossypium raimondii HOM05D000397 ORTHO05D002023 7.3e-06 55.5 135 31.9
HanXRQChr13g0424261 Helianthus annuus HOM05D000397 ORTHO05D002023 7.3e-06 55.5 164 28.0
Nn1g06534 Nelumbo nucifera HOM05D000397 ORTHO05D002023 9.6e-06 55.1 95 40.0
SalBow7G4188 Salvia bowleyana HOM05D000397 ORTHO05D002023 9.6e-06 55.1 158 31.6


User provided reference genes

Program Settings