Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G3037 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.0e-31 139.4 68 100.0
FAN02G2443 Fragaria x ananassa HOM05D003032 ORTHO05D000039 1.6e-13 79.0 39 92.3
RcHm_v2.0_Chr7g0233181 Rosa chinensis HOM05D003032 ORTHO05D000039 1.1e-09 66.2 36 77.8
FvH4_5g33841 Fragaria vesca HOM05D003032 ORTHO05D003456 1.4e-09 65.9 38 76.3
FAN18G4311 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.4e-09 65.9 38 76.3
FvH4_5g09390 Fragaria vesca HOM05D003032 ORTHO05D003456 4.1e-09 64.3 39 69.2
FAN18G1730 Fragaria x ananassa HOM05D003032 ORTHO05D003456 4.1e-09 64.3 39 69.2
FvH4_6g07700 Fragaria vesca HOM05D003032 ORTHO05D003456 5.4e-09 63.9 39 66.7
FAN14G4334 Fragaria x ananassa HOM05D003032 ORTHO05D003456 5.4e-09 63.9 39 66.7
FAN27G2259 Fragaria x ananassa HOM05D003032 ORTHO05D003456 7.0e-09 63.5 39 71.8
RcHm_v2.0_Chr3g0461521 Rosa chinensis HOM05D003032 ORTHO05D003456 3.5e-08 61.2 38 68.4
RcHm_v2.0_Chr3g0458461 Rosa chinensis HOM05D003032 ORTHO05D003456 1.0e-07 59.7 39 64.1
RcHm_v2.0_Chr2g0123521 Rosa chinensis HOM05D003032 ORTHO05D003456 1.3e-07 59.3 39 66.7
RcHm_v2.0_Chr2g0120621 Rosa chinensis HOM05D003032 ORTHO05D003456 2.3e-07 58.5 38 65.8
FAN14G0181 Fragaria x ananassa HOM05D003032 ORTHO05D003456 2.9e-07 58.2 38 63.2
Sc05g0006760 Simmondsia chinensis HOM05D003032 ORTHO05D003456 3.8e-07 57.8 38 65.8
FvH4_1g19120 Fragaria vesca HOM05D003032 ORTHO05D003456 5.0e-07 57.4 38 65.8
FAN11G3274 Fragaria x ananassa HOM05D003032 ORTHO05D003456 5.0e-07 57.4 39 66.7
FAN16G0417 Fragaria x ananassa HOM05D003032 ORTHO05D003456 5.0e-07 57.4 39 66.7
FAN25G2432 Fragaria x ananassa HOM05D003032 ORTHO05D003456 5.0e-07 57.4 39 66.7
RcHm_v2.0_Chr3g0458451 Rosa chinensis HOM05D003032 ORTHO05D003456 8.6e-07 56.6 39 61.5
CiPaw.09G133800 Carya illinoinensis HOM05D003032 ORTHO05D003456 1.1e-06 56.2 38 63.2
MD04G1192400 Malus domestica HOM05D003032 ORTHO05D003456 1.1e-06 56.2 38 63.2
RcHm_v2.0_Chr2g0111591 Rosa chinensis HOM05D003032 ORTHO05D003456 1.1e-06 56.2 38 63.2
RcHm_v2.0_Chr2g0111631 Rosa chinensis HOM05D003032 ORTHO05D003456 1.1e-06 56.2 38 63.2
RcHm_v2.0_Chr4g0398421 Rosa chinensis HOM05D003032 ORTHO05D003456 1.1e-06 56.2 39 61.5
FAN21G3139 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.9e-06 55.5 39 64.1
FAN21G3669 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.9e-06 55.5 39 64.1
HanXRQChr04g0112231 Helianthus annuus HOM05D003032 ORTHO05D003456 1.9e-06 55.5 39 64.1
RcHm_v2.0_Chr5g0012411 Rosa chinensis HOM05D003032 ORTHO05D003456 1.9e-06 55.5 39 64.1
ClCG01G024060 Citrullus lanatus HOM05D003032 ORTHO05D003456 2.5e-06 55.1 38 60.5
Prupe.4G070300 Prunus persica HOM05D003032 ORTHO05D003456 2.5e-06 55.1 40 65.0
CiPaw.09G133700 Carya illinoinensis HOM05D003032 ORTHO05D003456 4.2e-06 54.3 38 63.2
MD10G1271300 Malus domestica HOM05D003032 ORTHO05D003456 4.2e-06 54.3 40 60.0
Peaxi162Scf00047g00922 Petunia axillaris HOM05D003032 ORTHO05D003456 5.5e-06 53.9 38 63.2
Peaxi162Scf01055g00115 Petunia axillaris HOM05D003032 ORTHO05D003456 5.5e-06 53.9 38 63.2
Sed0025293 Sechium edule HOM05D003032 ORTHO05D003456 5.5e-06 53.9 38 60.5
TWI09G1589 Tripterygium wilfordii HOM05D003032 ORTHO05D003456 5.5e-06 53.9 41 58.5
Lalb_Chr07g0186181 Lupinus albus HOM05D003032 ORTHO05D003456 7.2e-06 53.5 38 60.5
ECA236G0712 Erigeron canadensis HOM05D003032 ORTHO05D003456 9.5e-06 53.1 39 59.0
Potri.011G075600 Populus trichocarpa HOM05D003032 ORTHO05D003456 9.5e-06 53.1 38 63.2


User provided reference genes

Program Settings