Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2999 Fragaria x ananassa HOM05D004021 ORTHO05D003767 9.7e-178 626.7 318 100.0
FAN09G3084 Fragaria x ananassa HOM05D004021 ORTHO05D003767 3.1e-160 568.5 289 99.3
FAN20G1338 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.2e-159 566.6 289 99.0
FAN02G4319 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.6e-159 566.2 289 99.0
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 3.4e-146 521.9 263 99.2
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 4.4e-146 521.5 263 99.2
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.3e-145 517.7 263 97.7
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.5e-143 511.5 282 92.2
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 1.1e-117 427.2 283 79.9
FAN20G0872 Fragaria x ananassa HOM05D004021 ORTHO05D003767 9.2e-112 407.5 289 76.1
FAN13G2039 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.5e-81 305.1 149 100.0
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 5.0e-73 278.9 299 56.2
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 1.8e-54 217.2 299 48.5
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 2.6e-53 213.4 298 49.3
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 2.8e-36 156.8 268 40.3
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 2.5e-32 143.7 268 38.1
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 4.0e-30 136.3 277 36.1
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 4.0e-30 136.3 280 35.0
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 1.2e-29 134.8 301 35.9
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.4e-29 133.3 273 34.8
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 1.0e-25 121.7 274 36.9
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 1.7e-25 120.9 301 31.2
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 1.7e-25 120.9 274 32.5
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 2.3e-25 120.6 267 31.8
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 8.6e-25 118.6 287 32.8
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 4.7e-23 112.8 302 32.1
Cpa.g.sc7.255 Carica papaya HOM05D004021 ORTHO05D003767 3.1e-22 110.2 304 31.9
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 5.2e-22 109.4 242 33.9
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 5.2e-22 109.4 288 32.3
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 2.6e-21 107.1 308 30.8
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.3e-20 104.8 269 31.6
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.7e-20 104.4 269 31.2
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 1.4e-19 101.3 305 33.1
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.4e-19 101.3 293 30.7
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 3.0e-17 93.6 291 28.2
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 6.6e-17 92.4 346 26.9
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.1e-16 91.7 291 28.2
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.1e-16 91.7 291 27.8
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.5e-16 91.3 269 32.3
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 8.0e-15 85.5 305 28.9
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 1.1e-14 85.1 302 29.1
TAR626G1566 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.0e-09 68.6 248 27.8
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 1.3e-09 68.2 264 26.1
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.3e-09 68.2 246 27.6
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 2.3e-09 67.4 259 27.4
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 1.6e-07 61.2 254 24.8
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 2.8e-07 60.5 236 28.0
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.1e-06 58.5 273 27.8
ClCG11G015210 Citrullus lanatus HOM05D004021 ORTHO05D003767 1.4e-06 58.2 177 33.9
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 5.2e-06 56.2 269 28.3
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 8.9e-06 55.5 182 32.4


User provided reference genes

Program Settings