Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.0e-55 217.6 118 100.0
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.5e-54 215.3 118 99.2
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.3e-54 214.9 118 98.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.4e-52 209.5 118 96.6
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.9e-49 199.1 118 91.5
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 5.0e-47 191.0 118 86.4
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 6.6e-47 190.7 118 87.3
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 5.8e-43 177.6 109 89.0
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.4e-41 172.9 109 86.2
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 2.3e-39 165.6 120 75.8
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 3.6e-37 158.3 116 72.4
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 8.1e-37 157.1 116 69.8
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 6.8e-36 154.1 116 69.0
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 6.8e-36 154.1 118 70.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.4e-35 151.8 118 69.5
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 5.8e-35 151.0 118 69.5
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 7.6e-35 150.6 115 71.3
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 2.2e-34 149.1 116 70.7
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 9.2e-33 143.7 117 70.9
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.1e-32 142.5 118 64.4
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 3.5e-32 141.7 118 63.6
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 3.5e-32 141.7 118 68.6
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 6.0e-32 141.0 119 68.1
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 7.8e-32 140.6 120 64.2
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.3e-31 139.8 120 66.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 3.0e-31 138.7 117 67.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 6.6e-31 137.5 121 63.6
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 8.6e-31 137.1 116 62.1
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.1e-30 136.7 120 62.5
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.9e-30 136.0 120 64.2
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 2.5e-30 135.6 116 65.5
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.5e-30 135.6 118 64.4
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.3e-30 134.8 116 60.3
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 4.3e-30 134.8 118 65.3
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 5.6e-30 134.4 116 63.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 5.6e-30 134.4 117 63.2
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 5.6e-30 134.4 117 63.2
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 5.6e-30 134.4 116 61.2
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 7.3e-30 134.0 115 62.6
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 7.3e-30 134.0 119 61.3
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 2.1e-29 132.5 119 63.9
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 2.1e-29 132.5 119 61.3
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 2.8e-29 132.1 119 61.3
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 3.6e-29 131.7 120 62.5
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.4e-28 129.0 116 62.9
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 4.0e-28 128.3 120 62.5
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 8.9e-28 127.1 115 63.5
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 8.9e-28 127.1 119 63.0
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 8.9e-28 127.1 102 68.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.2e-27 126.7 119 61.3
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 5.8e-27 124.4 116 59.5
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 7.6e-27 124.0 118 59.3
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 7.6e-27 124.0 116 64.7
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.7e-26 122.9 117 58.1
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.2e-26 122.5 116 60.3
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 2.9e-26 122.1 118 61.9
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.9e-26 122.1 117 58.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 2.9e-26 122.1 119 60.5
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 6.4e-26 120.9 120 57.5
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.4e-25 119.8 118 60.2
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 61.9
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.9e-25 119.4 120 57.5
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 2.4e-25 119.0 116 58.6
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 4.2e-25 118.2 118 59.3
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 4.2e-25 118.2 118 59.3
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 5.4e-25 117.9 116 55.2
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 5.4e-25 117.9 120 56.7
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.2e-24 116.7 119 59.7
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 1.6e-24 116.3 114 58.8
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.5e-24 115.2 115 55.7
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.0e-24 114.4 115 54.8
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.7e-23 112.8 73 72.6
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.0e-23 112.1 123 57.7
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 8.7e-23 110.5 119 52.9
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 8.7e-23 110.5 121 52.1
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.9e-22 109.4 119 59.7
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.5e-22 109.0 116 56.0
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 3.3e-22 108.6 106 63.2
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 3.3e-22 108.6 137 48.2
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 9.6e-22 107.1 114 57.0
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 2.8e-21 105.5 116 52.6
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.6e-21 105.1 63 79.4
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 3.6e-21 105.1 83 69.9
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 4.8e-21 104.8 118 54.2
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.1e-20 103.6 117 51.3
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 1.1e-20 103.6 107 56.1
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.4e-20 102.4 105 58.1
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 3.1e-20 102.1 94 60.6
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 5.3e-20 101.3 116 51.7
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.2e-19 100.1 116 51.7
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.2e-19 100.1 109 58.7
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.0e-19 99.4 114 50.9
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.0e-19 99.4 74 66.2
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 2.6e-19 99.0 120 50.8
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 2.6e-19 99.0 70 65.7
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 5.8e-19 97.8 108 54.6
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 7.6e-19 97.4 114 49.1
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 9.9e-19 97.1 110 54.5
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 4.9e-18 94.7 118 50.8
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.4e-17 93.2 119 48.7
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.2e-17 92.0 62 72.6
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 5.4e-17 91.3 120 50.0
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 9.3e-17 90.5 104 51.0
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.1e-16 89.4 66 63.6
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.1e-16 89.4 66 63.6
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.3e-15 86.7 108 50.9
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 3.9e-15 85.1 116 53.4
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.6e-14 81.3 84 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.3e-13 80.1 76 55.3
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-12 76.6 84 48.8
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 3.1e-12 75.5 117 41.9
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 9.3e-09 63.9 67 50.7
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 7.9e-08 60.8 116 42.2
CiPaw.09G207700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.9e-06 56.2 121 43.8
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 3.3e-06 55.5 110 39.1


User provided reference genes

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