Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 7.6e-92 340.5 173 100.0
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.0e-72 276.9 144 99.3
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 3.9e-72 275.0 144 98.6
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.9e-72 275.0 144 98.6
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.7e-67 259.6 144 93.1
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 3.2e-66 255.4 144 92.4
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 3.9e-64 248.4 144 91.0
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 1.2e-57 226.9 144 81.9
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 1.9e-55 219.5 144 79.9
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 5.7e-55 218.0 144 79.2
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 1.3e-54 216.9 144 77.1
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 3.7e-54 215.3 144 77.8
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 2.0e-52 209.5 144 76.4
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 2.0e-52 209.5 149 73.2
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 7.6e-52 207.6 144 72.9
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 7.6e-52 207.6 150 74.0
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 1.0e-51 207.2 143 76.2
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.3e-51 206.8 144 70.8
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 2.2e-51 206.1 148 71.6
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 2.9e-51 205.7 144 72.9
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 2.9e-51 205.7 149 72.5
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.8e-51 205.3 144 72.9
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.8e-51 205.3 144 72.9
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 3.8e-51 205.3 149 71.8
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 6.5e-51 204.5 144 72.2
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 1.9e-50 203.0 147 71.4
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 1.9e-50 203.0 144 72.2
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 2.5e-50 202.6 144 74.3
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 3.2e-50 202.2 144 71.5
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 4.2e-50 201.8 147 70.7
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 4.2e-50 201.8 147 72.1
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 4.2e-50 201.8 145 73.1
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 5.5e-50 201.4 144 72.2
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 7.1e-50 201.1 144 70.8
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 9.3e-50 200.7 147 68.7
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 1.2e-49 200.3 150 70.7
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 1.6e-49 199.9 143 72.0
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 2.1e-49 199.5 144 70.1
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 2.7e-49 199.1 143 69.9
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 3.5e-49 198.7 143 71.3
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 6.1e-49 198.0 148 68.9
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 7.9e-49 197.6 144 69.4
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 1.0e-48 197.2 147 70.7
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 1.3e-48 196.8 143 69.9
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 1.8e-48 196.4 150 68.0
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 2.3e-48 196.1 144 68.8
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 2.3e-48 196.1 143 67.8
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 3.9e-48 195.3 142 69.7
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 5.1e-48 194.9 107 96.3
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 5.1e-48 194.9 144 68.1
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 6.7e-48 194.5 144 67.4
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 8.7e-48 194.1 147 66.7
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 8.7e-48 194.1 143 69.2
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 1.9e-47 193.0 144 69.4
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 2.5e-47 192.6 145 70.3
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 3.3e-47 192.2 143 68.5
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 4.3e-47 191.8 143 68.5
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 4.3e-47 191.8 143 68.5
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 5.7e-47 191.4 144 68.1
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 7.4e-47 191.0 143 66.4
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 7.4e-47 191.0 144 66.7
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 9.7e-47 190.7 149 65.8
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 1.3e-46 190.3 143 67.1
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 1.6e-46 189.9 143 66.4
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 1.6e-46 189.9 147 64.6
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 2.8e-46 189.1 149 65.1
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 3.7e-46 188.7 142 68.3
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 4.8e-46 188.3 143 65.7
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 6.3e-46 188.0 143 66.4
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 8.2e-46 187.6 158 60.8
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 1.1e-45 187.2 143 67.1
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 1.1e-45 187.2 144 63.9
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.1e-45 187.2 142 68.3
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.4e-45 186.8 167 61.7
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 1.8e-45 186.4 149 66.4
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 2.4e-45 186.0 143 65.0
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 4.1e-45 185.3 143 67.8
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 6.9e-45 184.5 143 66.4
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 6.9e-45 184.5 143 67.1
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 2.0e-44 183.0 144 63.2
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 2.0e-44 183.0 143 65.0
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 2.6e-44 182.6 143 65.7
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 2.6e-44 182.6 143 65.0
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 4.5e-44 181.8 144 62.5
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 1.3e-43 180.3 143 64.3
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 1.3e-43 180.3 150 62.0
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 1.7e-43 179.9 143 64.3
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 8.5e-43 177.6 149 65.1
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.1e-42 177.2 143 63.6
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 1.9e-42 176.4 150 60.0
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 2.5e-42 176.0 147 61.2
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 1.6e-41 173.3 153 62.1
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 6.7e-40 167.9 169 56.2
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 2.0e-39 166.4 150 58.7
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 1.7e-38 163.3 144 60.4
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 2.8e-38 162.5 147 57.1
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.1e-37 160.6 112 71.4
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 1.1e-37 160.6 159 57.2
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 7.7e-36 154.5 154 53.2
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 8.5e-35 151.0 178 52.8
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 1.2e-33 147.1 114 69.3
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.9e-32 142.1 144 52.8
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 5.3e-29 131.7 144 52.1
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 2.0e-28 129.8 84 75.0
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 9.4e-26 120.9 147 44.9
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 1.2e-25 120.6 82 73.2
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 6.1e-25 118.2 137 50.4
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 8.0e-25 117.9 84 71.4
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 9.7e-23 110.9 84 65.5
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.8e-21 106.7 81 70.4
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 5.9e-20 101.7 62 79.0
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 6.5e-19 98.2 148 39.9
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 2.7e-17 92.8 63 74.6
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 1.8e-16 90.1 144 38.2
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 1.8e-16 90.1 115 37.4
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 3.7e-14 82.4 95 50.5
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 1.7e-11 73.6 102 41.2
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 8.5e-11 71.2 156 32.1
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 8.5e-11 71.2 156 32.1
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 6.8e-08 61.6 95 42.1
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 8.3e-06 54.7 148 31.8


User provided reference genes

Program Settings