Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 7.3e-242 840.1 418 100.0
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 5.1e-235 817.4 416 97.4
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.6e-217 759.2 385 96.9
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 3.2e-205 718.4 388 91.0
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.8e-201 704.5 374 93.0
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.8e-171 606.3 390 78.2
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.9e-157 559.7 393 70.7
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 7.3e-157 557.8 382 70.9
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.2e-156 557.0 395 69.6
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.2e-156 557.0 376 73.4
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 6.2e-156 554.7 341 76.8
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.2e-154 550.4 368 72.3
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.1e-152 543.9 392 66.6
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.1e-152 543.9 392 66.8
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 3.2e-152 542.3 392 66.6
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 5.4e-152 541.6 383 68.9
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.0e-150 537.3 389 67.9
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 2.5e-149 532.7 389 66.3
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 9.5e-149 530.8 400 63.8
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.3e-147 526.2 368 69.3
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 3.1e-147 525.8 394 66.0
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.5e-146 523.5 423 63.6
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 2.6e-146 522.7 385 66.5
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 7.5e-146 521.2 375 69.3
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.9e-145 519.2 330 73.0
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.9e-145 518.5 390 66.2
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 4.1e-144 515.4 390 66.4
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 4.1e-144 515.4 388 68.6
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 5.4e-144 515.0 396 64.4
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.6e-143 513.5 387 68.0
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.7e-143 512.7 381 65.9
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 6.0e-143 511.5 326 72.4
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 3.9e-142 508.8 383 65.8
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 5.1e-142 508.4 394 64.7
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.9e-141 506.5 407 62.2
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 7.3e-141 504.6 361 68.1
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 9.5e-141 504.2 378 64.6
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.6e-140 503.4 331 72.8
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 8.1e-140 501.1 322 73.0
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.4e-139 500.4 367 65.4
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.8e-139 500.0 417 61.4
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 2.3e-139 499.6 399 61.7
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 3.1e-139 499.2 338 68.9
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.2e-138 497.3 332 70.5
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.6e-138 496.1 368 65.5
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 1.4e-136 490.3 366 65.0
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.9e-136 490.0 382 62.8
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 4.1e-136 488.8 380 63.4
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 7.1e-136 488.0 328 68.6
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.6e-135 486.9 417 57.3
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.1e-135 486.5 343 68.2
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 2.7e-135 486.1 394 62.2
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.3e-134 483.0 381 62.2
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 8.6e-134 481.1 389 62.0
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.1e-133 480.7 333 68.5
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.5e-133 480.3 385 61.6
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 9.6e-133 477.6 380 62.6
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.2e-132 477.2 389 61.4
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.2e-132 477.2 389 61.4
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.2e-132 477.2 390 60.5
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.6e-132 476.9 345 67.2
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 6.2e-132 474.9 332 66.6
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 8.1e-132 474.6 394 62.2
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.8e-131 473.4 390 62.1
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 4.4e-130 468.8 377 62.1
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 5.8e-130 468.4 333 67.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 5.8e-130 468.4 328 67.1
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.2e-128 462.6 330 66.7
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 4.2e-128 462.2 334 66.5
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 5.4e-128 461.8 376 60.1
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 5.4e-128 461.8 385 62.6
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 7.1e-128 461.5 333 65.5
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 7.8e-127 458.0 317 71.0
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.0e-126 456.1 325 66.5
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.3e-125 452.6 418 56.0
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.4e-122 442.6 335 60.9
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.6e-119 432.2 327 64.5
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.0e-118 431.0 382 58.6
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.9e-118 429.1 376 59.6
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 5.1e-118 428.7 545 47.5
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.3e-117 426.0 330 60.3
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 5.6e-117 425.2 379 59.6
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.6e-117 425.2 330 60.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 7.4e-117 424.9 379 59.6
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.3e-113 414.1 328 62.5
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 6.0e-111 405.2 328 59.1
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.0e-110 404.4 291 70.1
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 3.3e-109 399.4 316 61.4
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 3.1e-107 392.9 262 68.3
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 7.6e-106 388.3 242 71.5
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 6.3e-100 368.6 364 54.9
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.1e-99 367.9 292 65.1
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 4.2e-96 355.9 309 57.6
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.9e-93 347.1 387 52.7
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 2.2e-89 333.6 322 50.3
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 6.7e-86 322.0 328 48.2
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.9e-80 303.9 256 55.5
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 8.0e-79 298.5 368 46.7
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.3e-76 291.2 171 74.9
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.6e-71 274.2 333 44.4
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.7e-65 254.2 169 66.3
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 9.1e-59 231.9 351 38.7
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.4e-35 154.1 140 53.6
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.6e-34 151.4 103 71.8
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.6e-31 141.4 78 79.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 6.6e-25 119.4 101 62.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.2e-20 104.4 75 73.3
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.8e-15 87.4 97 47.4
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-14 85.1 50 76.0
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.4e-14 85.1 59 74.6
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 8.4e-12 75.9 81 50.6
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.1e-09 66.6 39 76.9
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 6.2e-07 59.7 47 53.2
Rhsim06G0143300 Rhododendron simsii HOM05D006713 ORTHO05D338742 2.4e-06 57.8 42 71.4


User provided reference genes

Program Settings