Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.5e-187 657.5 344 100.0
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.2e-175 619.0 347 94.8
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.2e-175 619.0 347 94.5
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.1e-174 616.7 347 94.2
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.1e-174 616.7 347 94.8
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 2.9e-159 565.5 347 86.5
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 5.3e-137 491.5 347 75.2
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 9.6e-131 470.7 347 71.5
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 3.9e-116 422.2 349 67.9
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.5e-115 419.5 352 67.3
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 6.5e-111 404.8 351 62.7
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.8e-108 396.7 352 62.5
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.7e-106 389.0 348 61.2
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 4.8e-106 388.7 351 59.3
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 4.5e-104 382.1 356 60.1
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.7e-103 380.2 352 58.8
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 2.2e-103 379.8 354 59.9
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 2.9e-103 379.4 352 58.8
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 1.4e-102 377.1 352 58.2
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 9.4e-102 374.4 345 61.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.6e-101 373.6 352 58.8
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.0e-100 370.9 267 70.8
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 5.1e-100 368.6 360 57.8
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 2.6e-99 366.3 295 65.4
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 7.4e-99 364.8 335 58.8
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 4.8e-98 362.1 360 56.1
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 2.0e-96 356.7 357 58.3
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.5e-96 355.5 256 68.4
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 2.2e-95 353.2 355 58.6
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.2e-95 353.2 351 56.1
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.5e-94 350.5 269 65.4
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 3.2e-94 349.4 329 58.4
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 5.5e-94 348.6 351 57.5
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 9.4e-94 347.8 350 56.6
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 4.7e-93 345.5 359 53.5
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 6.1e-93 345.1 331 58.9
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 6.1e-93 345.1 350 54.6
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 1.4e-92 344.0 256 67.2
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.3e-92 343.2 359 53.5
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.5e-91 340.5 272 65.4
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.0e-91 340.1 347 53.0
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 3.3e-91 339.3 266 65.8
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 5.7e-91 338.6 329 55.3
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.7e-90 337.0 285 62.1
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 1.7e-90 337.0 285 61.4
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.2e-90 336.7 272 65.1
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.8e-90 335.5 272 65.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 4.8e-90 335.5 272 65.1
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 8.2e-90 334.7 266 64.7
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.8e-89 333.6 357 52.4
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 5.3e-89 332.0 344 53.5
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 5.3e-89 332.0 356 52.0
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 7.0e-89 331.6 266 64.3
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.6e-88 330.5 343 53.9
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 2.7e-88 329.7 268 62.3
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 3.5e-88 329.3 266 62.4
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.5e-88 328.9 268 62.7
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 4.5e-88 328.9 266 62.0
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 5.9e-88 328.6 268 62.3
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.7e-87 327.0 351 55.6
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 8.5e-87 324.7 348 53.7
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 8.5e-87 324.7 357 51.5
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.5e-86 323.9 255 64.3
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.9e-86 323.6 317 54.6
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.5e-86 323.2 288 60.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 3.2e-86 322.8 271 62.7
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 7.2e-86 321.6 346 52.6
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.2e-85 320.9 266 60.9
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 2.1e-85 320.1 348 52.9
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 6.1e-85 318.5 349 51.0
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 8.0e-85 318.2 346 51.2
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.3e-84 316.6 283 58.3
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 2.3e-84 316.6 266 60.5
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 2.0e-83 313.5 351 51.9
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 2.0e-83 313.5 345 50.7
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 3.4e-83 312.8 325 53.8
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 3.4e-83 312.8 268 62.3
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 3.4e-83 312.8 322 53.7
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.3e-82 310.8 276 59.4
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.4e-81 307.4 317 55.5
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 3.1e-81 306.2 276 58.3
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 4.1e-81 305.8 295 54.6
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.0e-79 301.2 273 59.3
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.3e-79 300.8 273 58.2
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.3e-79 300.8 353 50.7
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.7e-79 300.4 266 58.6
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.2e-79 300.1 247 63.2
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 2.2e-79 300.1 346 50.6
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 5.0e-79 298.9 260 60.4
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 2.5e-78 296.6 272 60.7
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 7.2e-78 295.0 264 57.2
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 7.2e-78 295.0 271 56.5
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.2e-77 294.3 320 52.8
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 2.7e-77 293.1 356 48.0
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 3.0e-76 289.7 281 54.8
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.0e-76 289.7 280 53.6
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 5.0e-71 272.3 247 59.5
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.6e-69 267.3 234 59.8
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 3.6e-69 266.2 218 66.5
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.1e-69 265.4 356 47.8
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 6.8e-68 261.9 300 52.3
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.2e-67 261.2 231 60.6
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 4.4e-67 259.2 267 50.6
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.1e-65 254.6 206 60.7
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.5e-54 216.9 237 52.3
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 3.2e-41 173.3 160 56.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 5.2e-36 156.0 136 59.6
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.5e-22 111.3 289 31.1
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 7.4e-22 109.0 74 70.3
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 2.0e-19 100.9 308 28.2
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.1e-13 80.9 112 42.0
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 1.4e-09 68.2 304 25.0
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 4.2e-09 66.6 202 25.2
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 6.0e-08 62.8 273 26.4
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 7.9e-08 62.4 132 36.4
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 3.0e-07 60.5 68 44.1
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.9e-06 57.8 74 52.7


User provided reference genes

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