Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G2622 Fragaria x ananassa HOM05D001641 ORTHO05D015676 1.4e-53 212.6 105 100.0
FAN18G2532 Fragaria x ananassa HOM05D001641 ORTHO05D015676 2.1e-52 208.8 105 97.1
FAN11G3680 Fragaria x ananassa HOM05D001641 ORTHO05D015676 6.1e-52 207.2 105 96.2
FAN26G0827 Fragaria x ananassa HOM05D001641 ORTHO05D015676 6.1e-52 207.2 105 96.2
FAN11G2159 Fragaria x ananassa HOM05D001641 ORTHO05D015676 7.9e-52 206.8 105 96.2
FAN05G4340 Fragaria x ananassa HOM05D001641 ORTHO05D015676 1.0e-51 206.5 105 96.2
FAN14G0359 Fragaria x ananassa HOM05D001641 ORTHO05D015676 1.0e-51 206.5 105 96.2
FAN18G4158 Fragaria x ananassa HOM05D001641 ORTHO05D015676 1.0e-51 206.5 105 95.2
FAN02G2021 Fragaria x ananassa HOM05D001641 ORTHO05D015676 1.3e-51 206.1 105 95.2
FAN04G0496 Fragaria x ananassa HOM05D001641 ORTHO05D015676 4.3e-50 201.1 100 98.0
FAN17G2830 Fragaria x ananassa HOM05D001641 ORTHO05D015676 2.6e-39 165.2 84 97.6
FAN26G2928 Fragaria x ananassa HOM05D001641 ORTHO05D015676 5.9e-39 164.1 84 96.4
FAN20G2072 Fragaria x ananassa HOM05D001448 ORTHO05D007650 1.5e-34 149.4 81 93.8
FvH4_6g12000 Fragaria vesca HOM05D001641 ORTHO05D001667 5.3e-32 141.0 141 57.4
FAN05G0357 Fragaria x ananassa HOM05D001641 ORTHO05D001667 5.3e-32 141.0 141 57.4
FAN14G4770 Fragaria x ananassa HOM05D001641 ORTHO05D001667 5.3e-32 141.0 141 57.4
FAN02G3953 Fragaria x ananassa HOM05D001641 ORTHO05D001667 1.6e-31 139.4 141 56.7
FAN09G4135 Fragaria x ananassa HOM05D001641 ORTHO05D001667 5.9e-31 137.5 141 56.0
FAN14G1423 Fragaria x ananassa HOM05D001641 ORTHO05D001667 7.7e-31 137.1 141 56.0
RcHm_v2.0_Chr3g0463831 Rosa chinensis HOM05D001641 ORTHO05D001667 1.1e-24 116.7 152 48.0
PGSC0003DMG400020347 Solanum tuberosum HOM05D001641 ORTHO05D001667 6.3e-17 90.9 135 45.2
Thecc.05G021900 Theobroma cacao HOM05D001641 ORTHO05D001667 6.3e-17 90.9 135 44.4
Solyc09g014160.3 Solanum lycopersicum HOM05D001641 ORTHO05D001667 9.1e-16 87.0 136 42.6
Sopen09g007030 Solanum pennellii HOM05D001641 ORTHO05D001667 9.1e-16 87.0 136 42.6
Manes.09G102200 Manihot esculenta HOM05D001641 ORTHO05D001667 1.6e-15 86.3 134 43.3
Prupe.6G270900 Prunus persica HOM05D001641 ORTHO05D001667 2.0e-15 85.9 130 47.7
CAN.G355.13 Capsicum annuum HOM05D001641 ORTHO05D001667 2.7e-15 85.5 129 41.1
Sabra16G0107700 Salix brachista HOM05D001641 ORTHO05D001667 2.7e-15 85.5 136 44.1
Sabra06G0074200 Salix brachista HOM05D001641 ORTHO05D001667 5.9e-15 84.3 139 45.3
Ciclev10011239m.g Citrus clementina HOM05D001641 ORTHO05D001667 7.7e-15 84.0 136 43.4
COL.COLO4_14595 Corchorus olitorius HOM05D001641 ORTHO05D001667 7.7e-15 84.0 134 43.3
Duzib093G1558 Durio zibethinus HOM05D001641 ORTHO05D001667 7.7e-15 84.0 136 41.9
Peaxi162Scf00141g00081 Petunia axillaris HOM05D001641 ORTHO05D001667 7.7e-15 84.0 140 40.7
MD04G1147100 Malus domestica HOM05D001641 ORTHO05D001667 1.0e-14 83.6 140 42.9
Potri.006G096600 Populus trichocarpa HOM05D001641 ORTHO05D001667 1.0e-14 83.6 139 44.6
MSTRG.26798 Avicennia marina HOM05D001641 ORTHO05D001667 3.8e-14 81.6 137 39.4
MD12G1160400 Malus domestica HOM05D001641 ORTHO05D001667 3.8e-14 81.6 141 42.6
CiPaw.09G206200 Carya illinoinensis HOM05D001641 ORTHO05D001667 5.0e-14 81.3 139 40.3
Duzib128G0887 Durio zibethinus HOM05D001641 ORTHO05D001667 5.0e-14 81.3 134 41.8
Duzib106G0289 Durio zibethinus HOM05D001641 ORTHO05D001667 6.5e-14 80.9 136 40.4
Potri.016G111400 Populus trichocarpa HOM05D001641 ORTHO05D001667 6.5e-14 80.9 137 42.3
Cfa017255 Carpinus fangiana HOM05D001641 ORTHO05D001667 8.5e-14 80.5 138 41.3
Haze_20951 Corylus avellana HOM05D001641 ORTHO05D001667 8.5e-14 80.5 138 41.3
Haze_20953 Corylus avellana HOM05D001641 ORTHO05D001667 8.5e-14 80.5 138 41.3
Dinv37084 Davidia involucrata HOM05D001641 ORTHO05D001667 8.5e-14 80.5 138 38.4
Cc06_g01660 Coffea canephora HOM05D001641 ORTHO05D001667 1.5e-13 79.7 109 45.9
CSS0004795 Camellia sinensis var. sinensis HOM05D001641 ORTHO05D001667 1.9e-13 79.3 134 42.5
CSS0016472 Camellia sinensis var. sinensis HOM05D001641 ORTHO05D001667 1.9e-13 79.3 134 42.5
TWI77G0066 Tripterygium wilfordii HOM05D001641 ORTHO05D001667 1.9e-13 79.3 132 44.7
CANSAT35G1325 Cannabis sativa HOM05D001641 ORTHO05D001667 2.5e-13 79.0 132 40.2
GSVIVG01034008001 Vitis vinifera HOM05D001641 ORTHO05D001667 3.2e-13 78.6 108 44.4
Solyc10g085070.3 Solanum lycopersicum HOM05D001641 ORTHO05D001667 4.2e-13 78.2 122 41.0
Sopen10g034530 Solanum pennellii HOM05D001641 ORTHO05D001667 4.2e-13 78.2 122 41.0
PGSC0003DMG400011018 Solanum tuberosum HOM05D001641 ORTHO05D001667 4.2e-13 78.2 122 41.0
Gorai.007G378100 Gossypium raimondii HOM05D001641 ORTHO05D001667 5.5e-13 77.8 121 42.1
Gohir.A11G328700 Gossypium hirsutum HOM05D001641 ORTHO05D001667 7.2e-13 77.4 122 43.4
Nitab4.5_0000008g0730 Nicotiana tabacum HOM05D001641 ORTHO05D001667 7.2e-13 77.4 144 41.0
Nitab4.5_0001837g0010 Nicotiana tabacum HOM05D001641 ORTHO05D001667 7.2e-13 77.4 144 41.0
ClCG10G021840 Citrullus lanatus HOM05D001641 ORTHO05D001667 9.5e-13 77.0 130 39.2
Manes.08G087800 Manihot esculenta HOM05D001641 ORTHO05D001667 1.2e-12 76.6 143 39.9
Gohir.A04G088300 Gossypium hirsutum HOM05D001641 ORTHO05D001667 1.6e-12 76.3 135 40.0
Peaxi162Scf00009g00195 Petunia axillaris HOM05D001641 ORTHO05D001667 1.6e-12 76.3 124 41.1
Hma1.2p1_0244F.1_g101220 Hydrangea macrophylla HOM05D001641 ORTHO05D001667 2.1e-12 75.9 136 41.9
Atru.chr8.2199 Acer truncatum HOM05D001641 ORTHO05D001667 2.7e-12 75.5 140 41.4
Gohir.D04G128700 Gossypium hirsutum HOM05D001641 ORTHO05D001667 3.6e-12 75.1 135 39.3
Cpa.g.sc163.1 Carica papaya HOM05D001641 ORTHO05D001667 8.0e-12 73.9 135 38.5
TWI74G0768 Tripterygium wilfordii HOM05D001641 ORTHO05D001667 8.0e-12 73.9 136 44.1
Oeu004615.1 Olea europaea HOM05D001641 ORTHO05D001667 1.0e-11 73.6 144 34.7
TWI53G0423 Tripterygium wilfordii HOM05D001641 ORTHO05D001667 1.0e-11 73.6 130 38.5
Gorai.012G111800 Gossypium raimondii HOM05D001641 ORTHO05D001667 1.8e-11 72.8 135 38.5
CAN.G1297.3 Capsicum annuum HOM05D001641 ORTHO05D001667 4.0e-11 71.6 118 41.5
Nitab4.5_0004912g0080 Nicotiana tabacum HOM05D001641 ORTHO05D001667 5.2e-11 71.2 123 41.5
Oeu044361.1 Olea europaea HOM05D001641 ORTHO05D001667 5.2e-11 71.2 144 35.4
TAR623G0053 Trochodendron aralioides HOM05D001641 ORTHO05D001667 5.2e-11 71.2 135 37.8
Nitab4.5_0000652g0140 Nicotiana tabacum HOM05D001641 ORTHO05D001667 6.8e-11 70.9 125 40.8
Lj3A956T51 Lonicera japonica HOM05D001641 ORTHO05D001667 1.2e-10 70.1 122 39.3
AUR62025773 Chenopodium quinoa HOM05D001641 ORTHO05D001667 1.5e-10 69.7 144 36.1
SHI12785 Sapria himalayana HOM05D001641 ORTHO05D001667 1.5e-10 69.7 108 42.6
PGR031G0169 Punica granatum HOM05D001641 ORTHO05D001667 2.6e-10 68.9 146 37.0
Migut.J00224 Erythranthe guttata HOM05D001641 ORTHO05D001667 3.4e-10 68.6 122 40.2
Sed0022239 Sechium edule HOM05D001641 ORTHO05D001667 4.4e-10 68.2 120 40.8
AUR62041358 Chenopodium quinoa HOM05D001641 ORTHO05D001667 5.7e-10 67.8 144 35.4
Dinv35512 Davidia involucrata HOM05D001641 ORTHO05D001667 7.5e-10 67.4 47 72.3
Sc01g0006830 Simmondsia chinensis HOM05D001641 ORTHO05D001667 7.5e-10 67.4 134 35.8
SGA_v2.0_scaffold75G24999 Striga asiatica HOM05D001641 ORTHO05D001667 7.5e-10 67.4 112 39.3
MSTRG.10231 Avicennia marina HOM05D001641 ORTHO05D001667 9.8e-10 67.0 49 69.4
Rhsim05G0206300 Rhododendron simsii HOM05D001641 ORTHO05D001667 9.8e-10 67.0 140 37.9
DCAR_015457 Daucus carota HOM05D001641 ORTHO05D001667 1.3e-09 66.6 131 35.9
Migut.L01994 Erythranthe guttata HOM05D001641 ORTHO05D001667 1.7e-09 66.2 137 38.0
Hma1.2p1_0763F.1_g214660 Hydrangea macrophylla HOM05D001641 ORTHO05D001667 1.7e-09 66.2 135 37.8
Nn2g13606 Nelumbo nucifera HOM05D001641 ORTHO05D001667 1.7e-09 66.2 134 36.6
arahy.Tifrunner.gnm1.ann1.4BEG1R Arachis hypogaea HOM05D001641 ORTHO05D001667 2.2e-09 65.9 145 31.0
ECA236G1576 Erigeron canadensis HOM05D001641 ORTHO05D001667 3.7e-09 65.1 143 32.9
unitig_899.g15417 Utricularia gibba HOM05D001641 ORTHO05D001667 4.9e-09 64.7 117 36.8
Lj2C80T3 Lonicera japonica HOM05D001641 ORTHO05D001667 8.3e-09 63.9 134 35.1
Lalb_Chr01g0022911 Lupinus albus HOM05D001641 ORTHO05D001667 1.1e-08 63.5 52 63.5
Oeu015015.2 Olea europaea HOM05D001641 ORTHO05D001667 1.8e-08 62.8 134 36.6
Aa31LG3G1600 Aethionema arabicum HOM05D001641 ORTHO05D001667 3.1e-08 62.0 48 66.7
Thhalv10020222m.g Eutrema salsugineum HOM05D001641 ORTHO05D001667 3.1e-08 62.0 47 61.7
MSTRG.5598 Avicennia marina HOM05D001641 ORTHO05D001667 4.1e-08 61.6 43 72.1
Lalb_Chr13g0291271 Lupinus albus HOM05D001641 ORTHO05D001667 4.1e-08 61.6 129 37.2
Oeu028729.2 Olea europaea HOM05D001641 ORTHO05D001667 4.1e-08 61.6 136 33.8
THA.LOC104827040 Tarenaya hassleriana HOM05D001641 ORTHO05D001667 4.1e-08 61.6 73 49.3
ECA247G1117 Erigeron canadensis HOM05D001641 ORTHO05D001667 7.0e-08 60.8 124 34.7
Gohir.A01G225200 Gossypium hirsutum HOM05D001641 ORTHO05D001667 7.0e-08 60.8 115 40.0
Gorai.002G261000 Gossypium raimondii HOM05D001641 ORTHO05D001667 7.0e-08 60.8 115 40.0
Sed0014233 Sechium edule HOM05D001641 ORTHO05D001667 7.0e-08 60.8 126 34.1
arahy.Tifrunner.gnm1.ann1.JIF81Q Arachis hypogaea HOM05D001641 ORTHO05D001667 9.2e-08 60.5 53 62.3
arahy.Tifrunner.gnm1.ann1.UC3VQR Arachis hypogaea HOM05D001641 ORTHO05D001667 9.2e-08 60.5 53 62.3
HanXRQChr08g0220551 Helianthus annuus HOM05D001641 ORTHO05D001667 9.2e-08 60.5 44 63.6
Sp3g07520 Schrenkiella parvula HOM05D001641 ORTHO05D001667 9.2e-08 60.5 48 66.7
AL3G20130 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 1.2e-07 60.1 49 57.1
Lj1g0001530 Lotus japonicus HOM05D001641 ORTHO05D001667 1.2e-07 60.1 46 65.2
CARHR083430 Cardamine hirsuta HOM05D001641 ORTHO05D001667 1.6e-07 59.7 47 66.0
Sc07g0006840 Simmondsia chinensis HOM05D001641 ORTHO05D001667 1.6e-07 59.7 52 57.7
Actinidia29129 Actinidia chinensis HOM05D001641 ORTHO05D001667 2.0e-07 59.3 48 64.6
BcaNung02767 Brassica carinata HOM05D001641 ORTHO05D001667 2.0e-07 59.3 94 45.7
Gohir.D01G214800 Gossypium hirsutum HOM05D001641 ORTHO05D001667 2.0e-07 59.3 115 39.1
Actinidia13778 Actinidia chinensis HOM05D001641 ORTHO05D001667 2.7e-07 58.9 137 38.0
MELO3C009191.2 Cucumis melo HOM05D001641 ORTHO05D001667 4.5e-07 58.2 130 34.6
CsaV3_3G034150 Cucumis sativus L. HOM05D001641 ORTHO05D001667 4.5e-07 58.2 130 34.6
BcaC09g48051 Brassica carinata HOM05D001641 ORTHO05D001667 5.9e-07 57.8 41 68.3
BolC1t05476H Brassica oleracea HOM05D001641 ORTHO05D001667 5.9e-07 57.8 41 68.3
SalBow5G3431 Salvia bowleyana HOM05D001641 ORTHO05D001667 5.9e-07 57.8 104 42.3
A03p36150 Brassica napus HOM05D001641 ORTHO05D001667 7.7e-07 57.4 43 72.1
Lsat_1_v5_gn_8_99861 Lactuca sativa HOM05D001641 ORTHO05D001667 7.7e-07 57.4 59 54.2
C09p74550 Brassica napus HOM05D001641 ORTHO05D001667 1.0e-06 57.0 94 45.7
Phvul.008G107800 Phaseolus vulgaris HOM05D001641 ORTHO05D001667 1.0e-06 57.0 40 70.0
TAR369G0244 Trochodendron aralioides HOM05D001641 ORTHO05D001667 1.0e-06 57.0 135 30.4
Lsat_1_v5_gn_9_36081 Lactuca sativa HOM05D001641 ORTHO05D001667 1.3e-06 56.6 119 36.1
THA.LOC104824521 Tarenaya hassleriana HOM05D001641 ORTHO05D001667 1.3e-06 56.6 126 33.3
BraA01t04318Z Brassica rapa HOM05D001641 ORTHO05D001667 1.7e-06 56.2 44 65.9
DCAR_028828 Daucus carota HOM05D001641 ORTHO05D001667 1.7e-06 56.2 127 33.1
Thhalv10017664m.g Eutrema salsugineum HOM05D001641 ORTHO05D001667 1.7e-06 56.2 42 64.3
Phvul.010G008500 Phaseolus vulgaris HOM05D001641 ORTHO05D001667 1.7e-06 56.2 135 31.1
SGA_v2.0_scaffold106G30523 Striga asiatica HOM05D001641 ORTHO05D001667 1.7e-06 56.2 147 36.1
TAR633G1677 Trochodendron aralioides HOM05D001641 ORTHO05D001667 1.7e-06 56.2 136 33.1
unitig_46.g18408 Utricularia gibba HOM05D001641 ORTHO05D001667 1.7e-06 56.2 128 32.0
BolC9t60187H Brassica oleracea HOM05D001641 ORTHO05D001667 2.3e-06 55.8 94 43.6
Carub.0006s0072 Capsella rubella HOM05D001641 ORTHO05D001667 2.3e-06 55.8 96 42.7
HanXRQChr15g0464001 Helianthus annuus HOM05D001641 ORTHO05D001667 2.3e-06 55.8 44 59.1
Sp6g40530 Schrenkiella parvula HOM05D001641 ORTHO05D001667 2.3e-06 55.8 109 37.6
HanXRQChr10g0286991 Helianthus annuus HOM05D001641 ORTHO05D001667 2.9e-06 55.5 135 31.1
AL6G11020 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 3.8e-06 55.1 104 40.4
Gohir.D11G347700 Gossypium hirsutum HOM05D001641 ORTHO05D001667 3.8e-06 55.1 44 59.1
A10p33630 Brassica napus HOM05D001641 ORTHO05D001667 5.0e-06 54.7 94 43.6
BraA10t45394Z Brassica rapa HOM05D001641 ORTHO05D001667 5.0e-06 54.7 94 43.6
Psat3g130960 Pisum sativum HOM05D001641 ORTHO05D001667 5.0e-06 54.7 51 56.9
Ca_09169_v3 Cicer arietinum L. HOM05D001641 ORTHO05D001667 6.6e-06 54.3 51 56.9
VMungo0331G1007 Vigna mungo HOM05D001641 ORTHO05D001667 6.6e-06 54.3 45 55.6
AT5G01170 Arabidopsis thaliana HOM05D001641 ORTHO05D001667 8.6e-06 53.9 95 41.1
Glyma.01G111900 Glycine max HOM05D001641 ORTHO05D001667 8.6e-06 53.9 126 35.7


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