Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0392 Fragaria x ananassa HOM05D004748 ORTHO05D005825 5.4e-251 870.5 449 100.0
FAN05G2438 Fragaria x ananassa HOM05D004748 ORTHO05D005825 5.4e-251 870.5 449 100.0
FAN14G2305 Fragaria x ananassa HOM05D004748 ORTHO05D005825 1.0e-241 839.7 448 97.1
FvH4_6g37160 Fragaria vesca HOM05D004748 ORTHO05D005825 2.1e-234 815.5 447 94.6
FAN09G1322 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.9e-226 786.9 448 92.0
RcHm_v2.0_Chr2g0149771 Rosa chinensis HOM05D004748 ORTHO05D005825 2.5e-219 765.4 456 89.9
Prupe.3G019200 Prunus persica HOM05D004748 ORTHO05D005825 6.1e-202 707.6 457 82.7
MD09G1160600 Malus domestica HOM05D004748 ORTHO05D005825 5.2e-201 704.5 461 83.5
MD17G1146400 Malus domestica HOM05D004748 ORTHO05D005825 3.7e-199 698.4 465 81.7
Potri.010G251300 Populus trichocarpa HOM05D004748 ORTHO05D005825 1.2e-186 656.8 457 77.5
PGR102G1746 Punica granatum HOM05D004748 ORTHO05D005825 6.1e-186 654.4 464 77.2
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 1.8e-185 652.9 395 84.3
TWI12G1435 Tripterygium wilfordii HOM05D004748 ORTHO05D005825 5.2e-185 651.4 463 75.4
Thecc.06G061000 Theobroma cacao HOM05D004748 ORTHO05D005825 1.2e-184 650.2 393 83.5
CiPaw.01G089000 Carya illinoinensis HOM05D004748 ORTHO05D005825 5.7e-184 647.9 388 85.1
CANSAT01G3164 Cannabis sativa HOM05D004748 ORTHO05D005825 1.3e-183 646.7 447 77.2
Sabra10G0195200 Salix brachista HOM05D004748 ORTHO05D005825 2.8e-183 645.6 457 76.4
Gohir.D06G120700 Gossypium hirsutum HOM05D004748 ORTHO05D005825 5.4e-182 641.3 451 75.4
Gorai.010G141000 Gossypium raimondii HOM05D004748 ORTHO05D005825 5.4e-182 641.3 451 75.6
Manes.03G081362 Manihot esculenta HOM05D004748 ORTHO05D005825 2.0e-181 639.4 461 76.4
Gohir.A06G115900 Gossypium hirsutum HOM05D004748 ORTHO05D005825 1.7e-180 636.3 451 75.4
CsaV3_7G033760 Cucumis sativus L. HOM05D004748 ORTHO05D005825 2.9e-180 635.6 401 81.3
BcaB07g33612 Brassica carinata HOM05D004748 ORTHO05D005825 1.5e-179 633.3 366 86.9
Sed0019048 Sechium edule HOM05D004748 ORTHO05D005825 1.5e-179 633.3 459 73.9
Glyma.08G222000 Glycine max HOM05D004748 ORTHO05D005825 1.9e-179 632.9 384 83.3
GSVIVG01029626001 Vitis vinifera HOM05D004748 ORTHO05D005825 2.5e-179 632.5 387 83.5
TPR.G15725 Trifolium pratense HOM05D004748 ORTHO05D005825 3.3e-179 632.1 390 81.3
Cfa002138 Carpinus fangiana HOM05D004748 ORTHO05D005825 9.5e-179 630.6 445 76.0
THA.LOC104816897 Tarenaya hassleriana HOM05D004748 ORTHO05D005825 1.2e-178 630.2 366 86.1
BcaC08g43322 Brassica carinata HOM05D004748 ORTHO05D005825 2.1e-178 629.4 366 86.3
BolC6t35782H Brassica oleracea HOM05D004748 ORTHO05D005825 2.1e-178 629.4 366 86.3
Ca_20497_v3 Cicer arietinum L. HOM05D004748 ORTHO05D005825 2.1e-178 629.4 445 73.5
Sp1g38250 Schrenkiella parvula HOM05D004748 ORTHO05D005825 4.7e-178 628.2 458 74.0
QL05p082110 Quercus lobata HOM05D004748 ORTHO05D005825 6.1e-178 627.9 458 74.2
Phvul.008G254900 Phaseolus vulgaris HOM05D004748 ORTHO05D005825 8.0e-178 627.5 360 86.9
BraA06t23445Z Brassica rapa HOM05D004748 ORTHO05D005825 2.3e-177 625.9 366 86.1
Medtr4g008150 Medicago truncatula HOM05D004748 ORTHO05D005825 2.3e-177 625.9 391 80.3
A06p02380 Brassica napus HOM05D004748 ORTHO05D005825 5.2e-177 624.8 364 86.3
C06p06730 Brassica napus HOM05D004748 ORTHO05D005825 6.8e-177 624.4 363 86.5
CARHR041760 Cardamine hirsuta HOM05D004748 ORTHO05D005825 6.8e-177 624.4 366 85.5
VMungo0647G1450 Vigna mungo HOM05D004748 ORTHO05D005825 8.9e-177 624.0 382 82.7
CSS0006652 Camellia sinensis var. sinensis HOM05D004748 ORTHO05D005825 1.3e-175 620.2 360 84.4
AUR62025643 Chenopodium quinoa HOM05D004748 ORTHO05D005825 1.7e-175 619.8 385 81.3
AL1G59520 Arabidopsis lyrata HOM05D004748 ORTHO05D005825 2.2e-175 619.4 456 73.5
Eucgr.F04020 Eucalyptus grandis HOM05D004748 ORTHO05D005825 2.9e-175 619.0 362 84.5
Lj3g0017034 Lotus japonicus HOM05D004748 ORTHO05D005825 4.9e-175 618.2 448 73.0
Aa31LG10G3160 Aethionema arabicum HOM05D004748 ORTHO05D005825 6.4e-175 617.8 454 73.8
Peaxi162Scf00207g01631 Petunia axillaris HOM05D004748 ORTHO05D005825 6.4e-175 617.8 437 74.4
AT1G51610 Arabidopsis thaliana HOM05D004748 ORTHO05D005825 8.3e-175 617.5 459 72.8
BcaC08g43922 Brassica carinata HOM05D004748 ORTHO05D005825 8.3e-175 617.5 366 84.4
BolC6t36471H Brassica oleracea HOM05D004748 ORTHO05D005825 8.3e-175 617.5 366 84.4
Lalb_Chr04g0264641 Lupinus albus HOM05D004748 ORTHO05D005825 1.1e-174 617.1 451 74.3
Carub.0001s4046 Capsella rubella HOM05D004748 ORTHO05D005825 1.4e-174 616.7 458 72.9
BcaB02g11258 Brassica carinata HOM05D004748 ORTHO05D005825 2.4e-174 615.9 371 83.3
AUR62001358 Chenopodium quinoa HOM05D004748 ORTHO05D005825 2.0e-173 612.8 451 72.7
Migut.I01182 Erythranthe guttata HOM05D004748 ORTHO05D005825 2.0e-173 612.8 385 79.5
Actinidia31132 Actinidia chinensis HOM05D004748 ORTHO05D005825 2.7e-173 612.5 449 72.4
BraA05t20854Z Brassica rapa HOM05D004748 ORTHO05D005825 6.0e-173 611.3 456 72.8
DCAR_022622 Daucus carota HOM05D004748 ORTHO05D005825 1.3e-172 610.1 360 83.9
Duzib192G0179 Durio zibethinus HOM05D004748 ORTHO05D005825 2.3e-172 609.4 459 73.0
MBI14_g10723_MAGBIO Magnolia biondii HOM05D004748 ORTHO05D005825 3.3e-171 605.5 359 85.5
Aqoxy7G02343 Aquilegia oxysepala HOM05D004748 ORTHO05D005825 7.3e-171 604.4 402 77.4
PGSC0003DMG400026506 Solanum tuberosum HOM05D004748 ORTHO05D005825 9.5e-171 604.0 368 82.6
HanXRQChr10g0311461 Helianthus annuus HOM05D004748 ORTHO05D005825 1.2e-170 603.6 410 74.4
Sopen06g022700 Solanum pennellii HOM05D004748 ORTHO05D005825 1.2e-170 603.6 378 81.0
Solyc06g063250.3 Solanum lycopersicum HOM05D004748 ORTHO05D005825 2.8e-170 602.4 378 80.7
EL10Ac7g18182 Beta vulgaris HOM05D004748 ORTHO05D005825 4.7e-170 601.7 447 72.0
Cc04_g00320 Coffea canephora HOM05D004748 ORTHO05D005825 8.0e-170 600.9 411 75.2
Nn8g40686 Nelumbo nucifera HOM05D004748 ORTHO05D005825 1.1e-169 600.5 344 86.6
Hma1.2p1_0517F.1_g170670 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 3.1e-169 599.0 339 87.0
Rhsim12G0214600 Rhododendron simsii HOM05D004748 ORTHO05D005825 4.0e-169 598.6 395 76.5
MSTRG.10889 Avicennia marina HOM05D004748 ORTHO05D005825 1.2e-168 597.0 387 78.0
MELO3C024289.2 Cucumis melo HOM05D004748 ORTHO05D005825 5.8e-168 594.7 398 78.9
TAR625G1093 Trochodendron aralioides HOM05D004748 ORTHO05D005825 5.8e-168 594.7 456 69.5
Os04g0298200 Oryza sativa ssp. japonica HOM05D004748 ORTHO05D005825 7.5e-168 594.3 370 80.0
PSO170G5564 Papaver somniferum HOM05D004748 ORTHO05D005825 1.7e-167 593.2 422 73.9
Ah.15g094390 Amaranthus hybridus HOM05D004748 ORTHO05D005825 2.9e-167 592.4 449 71.0
A05p19500 Brassica napus HOM05D004748 ORTHO05D005825 8.3e-167 590.9 344 85.8
PSO017G2012 Papaver somniferum HOM05D004748 ORTHO05D005825 2.4e-166 589.3 404 75.0
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 3.2e-166 589.0 353 82.2
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 7.0e-166 587.8 350 83.1
CDE04G0266 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 9.2e-166 587.4 364 79.7
ATR0580G210 Amborella trichopoda HOM05D004748 ORTHO05D005825 3.5e-165 585.5 338 85.8
arahy.Tifrunner.gnm1.ann1.660VQ8 Arachis hypogaea HOM05D004748 ORTHO05D005825 4.6e-165 585.1 425 72.9
CDE07G1729 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 6.0e-165 584.7 364 79.4
Zm00001eb086340 Zea mays HOM05D004748 ORTHO05D005825 7.8e-165 584.3 369 78.9
Lsat_1_v5_gn_5_137380 Lactuca sativa HOM05D004748 ORTHO05D005825 7.3e-163 577.8 387 76.0
Atru.chr1.2705 Acer truncatum HOM05D004748 ORTHO05D005825 1.6e-162 576.6 460 68.0
SHI31092 Sapria himalayana HOM05D004748 ORTHO05D005825 1.4e-161 573.5 343 82.8
HPP92_026143 Vanilla planifolia HOM05D004748 ORTHO05D005825 2.3e-161 572.8 362 78.7
arahy.Tifrunner.gnm1.ann1.2A2X48 Arachis hypogaea HOM05D004748 ORTHO05D005825 7.5e-160 567.8 424 71.7
Hund18602 Selenicereus undatus HOM05D004748 ORTHO05D005825 7.5e-160 567.8 553 59.7
Ciclev10025586m.g Citrus clementina HOM05D004748 ORTHO05D005825 4.6e-157 558.5 422 72.0
SGA_v2.0_scaffold71G24004 Striga asiatica HOM05D004748 ORTHO05D005825 4.6e-157 558.5 339 82.6
Duzib235G0633 Durio zibethinus HOM05D004748 ORTHO05D005825 1.7e-156 556.6 452 67.7
CAN.G308.5 Capsicum annuum HOM05D004748 ORTHO05D005825 8.4e-151 537.7 309 86.4
ClCG09G001570 Citrullus lanatus HOM05D004748 ORTHO05D005825 8.4e-151 537.7 461 67.5
Nitab4.5_0003757g0030 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.1e-150 537.3 411 70.3
Nitab4.5_0001691g0140 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.2e-149 533.9 361 74.2
Lj5A24T50 Lonicera japonica HOM05D004748 ORTHO05D005825 1.1e-147 527.3 328 81.4
Psat7g261000 Pisum sativum HOM05D004748 ORTHO05D005825 5.6e-147 525.0 327 79.8
Oeu001810.2 Olea europaea HOM05D004748 ORTHO05D005825 1.2e-146 523.9 293 87.4
Lj9C541G21 Lonicera japonica HOM05D004748 ORTHO05D001811 2.8e-146 522.7 434 65.2
Hund05683 Selenicereus undatus HOM05D004748 ORTHO05D005825 2.2e-143 513.1 353 72.8
Peaxi162Scf00038g02524 Petunia axillaris HOM05D004748 ORTHO05D005825 1.9e-142 510.0 309 79.9
SMO228G0169 Selaginella moellendorffii HOM05D004748 ORTHO05D005825 3.0e-140 502.7 338 73.4
Mapoly0185s0006 Marchantia polymorpha HOM05D004748 ORTHO05D005825 5.1e-140 501.9 339 72.3
AagrBONN_evm.TU.Sc2ySwM_344.1578 Anthoceros agrestis HOM05D004748 ORTHO05D005825 8.7e-140 501.1 348 70.4
Hma1.2p1_0517F.1_g170660 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 3.2e-134 482.6 299 80.9
Pp3c20_1650 Physcomitrium patens HOM05D004748 ORTHO05D005825 5.1e-132 475.3 339 69.3
Nitab4.5_0012506g0020 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.1e-131 474.2 367 67.0
Glyma.07G020100 Glycine max HOM05D004748 ORTHO05D005825 4.3e-131 472.2 337 74.8
Nitab4.5_0002661g0120 Nicotiana tabacum HOM05D004748 ORTHO05D005825 2.9e-127 459.5 411 63.0
Thhalv10011469m.g Eutrema salsugineum HOM05D004748 ORTHO05D005825 9.6e-123 444.5 361 69.5
Sc12g0011080 Simmondsia chinensis HOM05D004748 ORTHO05D005825 8.2e-122 441.4 309 74.8
Dinv20350 Davidia involucrata HOM05D004748 ORTHO05D005825 1.8e-121 440.3 283 79.9
Zm00001eb420390 Zea mays HOM05D004748 ORTHO05D005825 3.5e-117 426.0 273 77.7
SEGI_05538 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 1.4e-113 414.1 251 80.9
vmacro17059 Vaccinium macrocarpon HOM05D004748 ORTHO05D005825 7.7e-96 355.1 208 85.1
Cpa.g.sc67.6 Carica papaya HOM05D004748 ORTHO05D005825 2.6e-91 340.1 284 67.3
Haze_16292 Corylus avellana HOM05D004748 ORTHO05D005825 5.9e-88 328.9 269 68.0
C06p13150 Brassica napus HOM05D004748 ORTHO05D005825 2.0e-80 303.9 186 82.8
Cre06.g289150 Chlamydomonas reinhardtii HOM05D004748 ORTHO05D005825 4.0e-76 289.7 330 47.9
MCO14G368 Micromonas commoda HOM05D004748 ORTHO05D005825 5.4e-73 279.3 335 46.0
FAN02G4052 Fragaria x ananassa HOM05D004748 ORTHO05D005825 7.0e-73 278.9 143 98.6
BcaB04g17188 Brassica carinata HOM05D001232 ORTHO05D001073 4.7e-69 266.2 362 49.2
FAN02G0724 Fragaria x ananassa HOM05D004748 ORTHO05D005825 3.4e-67 260.0 132 96.2
Haze_26513 Corylus avellana HOM05D004748 ORTHO05D005825 1.7e-58 231.1 334 36.8
Cpa.g.sc67.3 Carica papaya HOM05D004748 ORTHO05D005825 1.4e-57 228.0 124 87.9
PRCOL_00004355 Prasinoderma coloniale HOM05D004748 ORTHO05D005825 8.3e-50 202.2 372 38.2
Actinidia00640 Actinidia chinensis HOM05D004748 ORTHO05D005825 6.8e-44 182.6 104 85.6
Actinidia00641 Actinidia chinensis HOM05D004748 ORTHO05D005825 8.6e-39 165.6 109 78.0
FAN05G1723 Fragaria x ananassa HOM05D000043 ORTHO05D001551 3.1e-36 157.1 84 94.0
GSVIVG01029613001 Vitis vinifera HOM05D004748 ORTHO05D005825 8.9e-36 155.6 119 70.6
CARHR041770 Cardamine hirsuta HOM05D004748 ORTHO05D005825 2.2e-34 151.0 131 63.4
SEGI_05879 Sequoiadendron giganteum HOM05D004748 ORTHO05D002681 4.8e-29 133.3 101 64.4
BcaC03g16763 Brassica carinata HOM05D004748 ORTHO05D005825 3.4e-27 127.1 81 77.8
C02p46400 Brassica napus HOM05D004748 ORTHO05D005825 3.4e-27 127.1 81 77.8
BolC2t10691H Brassica oleracea HOM05D004748 ORTHO05D005825 3.4e-27 127.1 81 77.8
Haze_16297 Corylus avellana HOM05D004748 ORTHO05D005825 3.4e-27 127.1 103 67.0
SEGI_34839 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 2.2e-26 124.4 78 74.4
Haze_16294 Corylus avellana HOM05D004748 ORTHO05D005825 3.8e-26 123.6 84 78.6
A04p28800 Brassica napus HOM05D004748 ORTHO05D005825 1.4e-25 121.7 81 74.1
BraA08t33859Z Brassica rapa HOM05D004748 ORTHO05D005825 1.4e-25 121.7 81 74.1
CAN.G126.34 Capsicum annuum HOM05D004748 ORTHO05D005825 1.9e-25 121.3 187 38.0
BraA04t18357Z Brassica rapa HOM05D004748 ORTHO05D005825 5.4e-25 119.8 81 72.8
GSVIVG01029603001 Vitis vinifera HOM05D004748 ORTHO05D005825 4.6e-24 116.7 64 89.1
RcHm_v2.0_Chr1g0341791 Rosa chinensis HOM05D004748 ORTHO05D005825 3.6e-21 107.1 64 85.9
RcHm_v2.0_Chr7g0197681 Rosa chinensis HOM05D004748 ORTHO05D005825 3.9e-15 87.0 54 85.2
A10p03860 Brassica napus HOM05D004748 ORTHO05D005825 1.1e-14 85.5 88 54.5
arahy.Tifrunner.gnm1.ann1.W4KKVA Arachis hypogaea HOM05D005785 ORTHO05D007962 6.2e-13 79.7 80 58.8
FAN03G2435 Fragaria x ananassa HOM05D000153 ORTHO05D000118 1.7e-10 71.6 40 85.0
BraA10t42660Z Brassica rapa HOM05D004748 ORTHO05D005825 8.4e-10 69.3 67 55.2
GSVIVG01029622001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.2e-08 65.5 36 86.1
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 1.3e-07 62.0 35 80.0
HanXRQChr12g0383231 Helianthus annuus HOM05D002835 ORTHO05D003008 2.3e-07 61.2 66 51.5
SEGI_11704 Sequoiadendron giganteum HOM05D004748 ORTHO05D006250 5.1e-07 60.1 38 73.7


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