Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1612 Fragaria x ananassa HOM05D000550 ORTHO05D209106 9.8e-55 216.9 134 100.0
FAN05G5372 Fragaria x ananassa HOM05D000550 ORTHO05D000400 1.1e-37 160.2 105 99.0
FAN09G3511 Fragaria x ananassa HOM05D000550 ORTHO05D000400 4.0e-16 88.6 41 92.7
FvH4_6g16850 Fragaria vesca HOM05D000550 ORTHO05D000400 4.1e-13 78.6 37 89.2
RcHm_v2.0_Chr3g0470851 Rosa chinensis HOM05D000550 ORTHO05D000400 7.8e-12 74.3 39 82.1
RcHm_v2.0_Chr3g0470661 Rosa chinensis HOM05D000550 ORTHO05D000400 2.8e-09 65.9 39 69.2
FAN14G1609 Fragaria x ananassa HOM05D000550 ORTHO05D000400 4.7e-09 65.1 39 69.2
RcHm_v2.0_Chr3g0470871 Rosa chinensis HOM05D000550 ORTHO05D000400 6.2e-09 64.7 39 71.8
MD04G1089500 Malus domestica HOM05D000550 ORTHO05D000400 1.1e-08 63.9 41 63.4
FAN02G3114 Fragaria x ananassa HOM05D000550 ORTHO05D000400 3.1e-08 62.4 35 71.4
FAN05G1265 Fragaria x ananassa HOM05D000550 ORTHO05D000400 6.8e-08 61.2 35 71.4
Prupe.7G126400 Prunus persica HOM05D000550 ORTHO05D000400 6.8e-08 61.2 38 65.8
FvH4_6g16730 Fragaria vesca HOM05D000550 ORTHO05D000400 8.9e-08 60.8 35 68.6
FAN05G3072 Fragaria x ananassa HOM05D000550 ORTHO05D000400 1.5e-07 60.1 35 68.6
FAN09G3868 Fragaria x ananassa HOM05D000550 ORTHO05D000400 1.5e-07 60.1 35 68.6
Prupe.7G126300 Prunus persica HOM05D000550 ORTHO05D000400 1.5e-07 60.1 40 65.0
MD12G1107800 Malus domestica HOM05D000550 ORTHO05D000400 2.0e-07 59.7 37 70.3
Gohir.D08G035250 Gossypium hirsutum HOM05D000550 ORTHO05D000400 4.4e-07 58.5 42 59.5
CSS0019488 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 9.9e-07 57.4 36 55.6
Medtr1g062860 Medicago truncatula HOM05D000550 ORTHO05D000400 9.9e-07 57.4 39 66.7
GSVIVG01033673001 Vitis vinifera HOM05D000550 ORTHO05D000400 9.9e-07 57.4 41 68.3
Lj5g0006142 Lotus japonicus HOM05D000550 ORTHO05D000400 1.3e-06 57.0 41 68.3
MD12G1108100 Malus domestica HOM05D000550 ORTHO05D000400 1.3e-06 57.0 39 64.1
Nn2g13783 Nelumbo nucifera HOM05D000550 ORTHO05D000400 1.3e-06 57.0 36 61.1
Nn2g13839 Nelumbo nucifera HOM05D000550 ORTHO05D000400 1.3e-06 57.0 36 61.1
Nn6g35228 Nelumbo nucifera HOM05D000550 ORTHO05D000400 1.3e-06 57.0 36 61.1
Oeu041482.1 Olea europaea HOM05D000550 ORTHO05D000400 1.7e-06 56.6 36 61.1
Potri.006G047500 Populus trichocarpa HOM05D000550 ORTHO05D000400 1.7e-06 56.6 33 66.7
Aa31sc125G20 Aethionema arabicum HOM05D000550 ORTHO05D000400 2.2e-06 56.2 33 66.7
Aa31sc269G40 Aethionema arabicum HOM05D000550 ORTHO05D000400 2.2e-06 56.2 33 66.7
arahy.Tifrunner.gnm1.ann1.CII6MM Arachis hypogaea HOM05D000550 ORTHO05D000400 2.9e-06 55.8 35 65.7
arahy.Tifrunner.gnm1.ann1.ZEF0VH Arachis hypogaea HOM05D000550 ORTHO05D000400 2.9e-06 55.8 35 65.7
CSS0044077 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 2.9e-06 55.8 36 55.6
CSS0008799 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 3.8e-06 55.5 36 55.6
Cpa.g.sc92.97 Carica papaya HOM05D000550 ORTHO05D000400 3.8e-06 55.5 39 61.5
ClCG04G009410 Citrullus lanatus HOM05D000550 ORTHO05D000400 3.8e-06 55.5 40 62.5
Prupe.7G126200 Prunus persica HOM05D000550 ORTHO05D000400 3.8e-06 55.5 38 60.5
Dinv37333 Davidia involucrata HOM05D000550 ORTHO05D000400 4.9e-06 55.1 39 61.5
Prupe.4G263500 Prunus persica HOM05D000550 ORTHO05D000400 4.9e-06 55.1 37 64.9
RcHm_v2.0_Chr3g0470641 Rosa chinensis HOM05D000550 ORTHO05D000400 4.9e-06 55.1 33 63.6
Sed0019523 Sechium edule HOM05D000550 ORTHO05D000400 4.9e-06 55.1 39 61.5
Lj2A118T30 Lonicera japonica HOM05D000550 ORTHO05D000400 6.4e-06 54.7 39 59.0
QL11p043243 Quercus lobata HOM05D000550 ORTHO05D000400 6.4e-06 54.7 39 56.4
TWI74G0080 Tripterygium wilfordii HOM05D000550 ORTHO05D000400 6.4e-06 54.7 34 58.8
EL10Ac7g16672 Beta vulgaris HOM05D000550 ORTHO05D000400 8.4e-06 54.3 36 55.6
MD04G1089400 Malus domestica HOM05D000550 ORTHO05D000400 8.4e-06 54.3 34 67.6
Nn6g35227 Nelumbo nucifera HOM05D000550 ORTHO05D000400 8.4e-06 54.3 31 67.7
Psat6g075480 Pisum sativum HOM05D000550 ORTHO05D000400 8.4e-06 54.3 36 58.3
QL07p042467 Quercus lobata HOM05D000550 ORTHO05D000400 8.4e-06 54.3 36 58.3
RcHm_v2.0_Chr3g0470681 Rosa chinensis HOM05D000550 ORTHO05D000400 8.4e-06 54.3 36 58.3
SalBow3G3105 Salvia bowleyana HOM05D000550 ORTHO05D000400 8.4e-06 54.3 32 62.5
TWI74G0864 Tripterygium wilfordii HOM05D000550 ORTHO05D000400 8.4e-06 54.3 38 63.2


User provided reference genes

Program Settings