Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.8e-119 432.6 208 100.0
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.3e-100 367.9 192 92.7
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.8e-77 292.4 195 79.0
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-72 276.9 206 73.3
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 1.0e-71 273.9 231 64.1
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.8e-71 273.1 229 64.2
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-68 263.8 202 71.3
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 8.0e-64 247.7 170 73.5
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 4.0e-55 218.8 153 75.2
FvH4_4g36820 Fragaria vesca HOM05D008398 ORTHO05D005682 1.6e-43 180.3 194 55.2
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 9.2e-36 154.5 213 48.4
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 1.9e-33 146.7 213 47.4
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 3.3e-33 146.0 207 47.8
FAN02G2570 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.1e-32 141.4 97 75.3
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.8e-30 135.2 200 42.5
FvH4_7g30481 Fragaria vesca HOM05D008398 ORTHO05D029520 1.7e-26 123.6 190 40.5
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.3e-26 123.2 189 40.7
FAN01G0845 Fragaria x ananassa HOM05D008398 ORTHO05D029520 5.1e-26 122.1 190 40.5
FAN10G3441 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.6e-26 121.7 192 39.1
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 2.5e-25 119.8 196 40.8
FAN01G0388 Fragaria x ananassa HOM05D008398 ORTHO05D035411 5.6e-25 118.6 196 40.8
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.3e-25 118.2 196 40.8
FAN10G3871 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.6e-25 117.9 189 39.7
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 1.2e-24 117.5 189 40.2
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 1.2e-24 117.5 189 40.2
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 2.4e-23 113.2 196 39.8
FAN14G3968 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.4e-21 105.1 54 94.4
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 3.5e-19 99.4 211 39.3
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 4.6e-19 99.0 188 39.9
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.6e-19 99.0 188 39.4
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 6.0e-19 98.6 211 38.9
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 7.8e-19 98.2 188 39.9
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-15 86.3 195 35.4
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 3.1e-15 86.3 202 35.6
FvH4_5g06100 Fragaria vesca HOM05D008398 ORTHO05D005682 6.9e-15 85.1 87 55.2
FAN01G2094 Fragaria x ananassa HOM05D008398 ORTHO05D029494 9.0e-15 84.7 200 35.0
FAN05G3589 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.0e-15 84.7 64 67.2
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 9.0e-15 84.7 208 36.5
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-14 84.3 200 37.0
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-14 84.3 196 34.7
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-14 82.4 195 32.8
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-14 82.4 195 32.8
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-13 80.5 124 44.4
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-13 79.3 227 32.6
FAN06G2579 Fragaria x ananassa HOM05D008398 ORTHO05D029494 4.9e-13 79.0 200 34.0
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.4e-12 77.4 199 36.2
FvH4_7g16480 Fragaria vesca HOM05D008398 ORTHO05D046080 1.9e-12 77.0 199 33.7
FAN03G1279 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.2e-12 76.3 109 45.0
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-12 75.9 208 32.7
FvH4_7g12650 Fragaria vesca HOM05D008398 ORTHO05D029494 5.4e-12 75.5 200 33.5
FAN06G0070 Fragaria x ananassa HOM05D008398 ORTHO05D029494 5.4e-12 75.5 200 33.5
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-12 75.5 228 31.6
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-11 74.3 199 33.2
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 2.1e-11 73.6 204 32.8
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-11 73.2 198 30.8
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-11 73.2 207 34.3
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-11 73.2 207 34.3
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-10 71.2 199 33.2
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.3e-10 70.1 198 30.3
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 5.1e-10 68.9 161 34.2
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-10 68.2 198 31.3
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.1e-09 67.8 119 37.0
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.9e-09 67.0 159 31.4
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 3.3e-09 66.2 115 39.1
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 3.3e-09 66.2 104 40.4
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 4.3e-09 65.9 177 31.1
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-09 65.9 177 31.6
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.4e-09 65.1 194 30.9
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-09 64.7 204 31.9
FAN06G3071 Fragaria x ananassa HOM05D008398 ORTHO05D046080 2.8e-08 63.2 196 31.6
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-08 62.0 200 31.0
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 8.1e-08 61.6 203 31.0
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-07 60.5 198 33.3
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-07 60.5 224 27.2
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-07 59.7 199 30.2
RcHm_v2.0_Chr1g0323581 Rosa chinensis HOM05D012901 ORTHO05D022659 3.1e-07 59.7 122 33.6
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 9.0e-07 58.2 191 29.3
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.0e-07 58.2 141 34.0
FAN05G2135 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-06 57.8 70 50.0
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-06 57.4 191 29.3
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-06 57.0 106 38.7
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 4.5e-06 55.8 160 30.0
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-06 55.5 193 28.5
FAN11G1254 Fragaria x ananassa HOM05D000588 ORTHO05D000637 9.9e-06 54.7 28 96.4
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.9e-06 54.7 164 33.5


User provided reference genes

Program Settings